Detail information of GWHGAAZE027169


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010060550.18.92669E-56PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial [Eucalyptus grandis]
COGYP_004652428.13E-153-deoxy-manno-octulosonate cytidylyltransferase
Swissprottr|Q9C920|KDSB_ARATH3E-543-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial (Precursor)
trEMBLtr|A0A059BN69|A0A059BN69_EUCGR3E-56Uncharacterized protein {ECO:0000313|EMBL:KCW67331.1}
TAIR10AT1G53000.13E-45Nucleotide-diphospho-sugar transferases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene1564796915651616+
GWHAAZE00000008mRNA1564796915651616+
GWHAAZE00000008exon1564796915648103+
GWHAAZE00000008exon1564878015649072+
GWHAAZE00000008exon1565007115650175+
GWHAAZE00000008exon1565132215651616+
GWHAAZE00000008CDS1564796915648103+
GWHAAZE00000008CDS1564878015649072+
GWHAAZE00000008CDS1565007115650175+
GWHAAZE00000008CDS1565132215651616+
Transcript Sequence

Network for GWHGAAZE027169

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02348.20CTP_transf_39976.80E-12
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00979kdsB Metabolic pathways map01100
Lipopolysaccharide biosynthesismap00540

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf18.712
SRR3591706second leaf20.003
SRR3591707mature leaf37.595
SRR3591708Shoot apex18.807
SRR3591709Stem13.410
SRR3591710White floral bud19.597
SRR3591711White flower22.915
SRR3591712Green floral bud18.830
SRR3591713Yellow flower29.273
SRP173429 SRR8316895Juvenile bud stage 10.209
SRR8316896Juvenile bud stage 12.192
SRR8316897Juvenile bud stage 6.472
SRR8316894Third green stage 4.413
SRR8316900Third green stage 17.660
SRR8316901Third green stage 15.210
SRR8316898Complete white stage 11.265
SRR8316899Complete white stage 23.024
SRR8316903Complete white stage 14.559
SRR8316902Silver flowering stage10.972
SRR8316904Silver flowering stage11.318
SRR8316905Silver flowering stage8.499
SRR8316906Gold flowering stage 26.369
SRR8316907Gold flowering stage 27.904
SRR8316908Gold flowering stage 18.701
SRP132670SRR6706286Control19.386
SRR6706287Light intensity 50%16.943
SRR6706288Light intensity 20%18.338
CNP0000432CNS0095592Slightly white alabastrum(diploid) 19.284
CNS0095593Slightly white alabastrum(diploid) 28.337
CNS0095594Slightly white alabastrum(diploid) 35.783
CNS0095595Whole white alabastrum(diploid) 26.835
CNS0095596Whole white alabastrum(diploid) 39.279
CNS0095597Whole white alabastrum(diploid) 49.835
CNS0095598Silvery flower (diploied) 120.749
CNS0095599Silvery flower (diploied) 215.386
CNS0095600Silvery flower (diploied) 328.189
CNS0095601Golden flower (diploid) 127.801
CNS0095602Golden flower (diploid) 224.773
CNS0095603Golden flower (diploid) 329.123
CNS0095604Slightly white alabastrum(tetraploid) 111.926
CNS0095605Slightly white alabastrum(tetraploid) 211.646
CNS0095606Slightly white alabastrum(tetraploid) 318.290
CNS0095607Whole white alabastrum(tetraploid) 110.929
CNS0095608Whole white alabastrum(tetraploid) 28.272
CNS0095609Whole white alabastrum(tetraploid) 314.183
CNS0095610Silvery flower (tetraploid) 127.720
CNS0095611Silvery flower (tetraploid) 238.689
CNS0095612Silvery flower (tetraploid) 318.269
CNS0095613Golden flower (tetraploid) 129.799
CNS0095614Golden flower (tetraploid) 230.191
CNS0095615Golden flower (tetraploid) 377.750
CRA001975CRR073297Stem 124.691
CRR073298Stem 221.877
CRR073299Stem 339.608
CRR073300Leaf 126.072
CRR073301Leaf 224.454
CRR073302Leaf 331.373
CRR073303Juvenile bud 133.581
CRR073304Juvenile bud 228.584
CRR073305Juvenile bud 325.705
CRR073306Third green 111.209
CRR073307Third green 28.409
CRR073308Third green 38.013
CRR073309Second white 115.743
CRR073310Second white 210.020
CRR073311Second white 39.518
CRR073312Silver flowering 19.508
CRR073313Silver flowering 210.217
CRR073314Silver flowering 310.140
CRR073315Gold flowering 179.813
CRR073316Gold flowering 285.350
CRR073317Gold flowering 388.430
CRR073318Tawny withering 120.288
CRR073319Tawny withering 212.654
CRR073320Tawny withering 316.024