Detail information of GWHGAAZE027367


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009346691.13.94334E-70PREDICTED: photosystem I reaction center subunit V, chloroplastic-like [Pyrus x bretschneideri]
Swissprottr|Q9S7N7|PSAG_ARATH4E-66Photosystem I reaction center subunit V, chloroplastic (Precursor)
trEMBLtr|M5W1I7|M5W1I7_PRUPE3E-68Uncharacterized protein {ECO:0000313|EMBL:EMJ07241.1}
TAIR10AT1G55670.18E-53photosystem I subunit G

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene1832703218327529+
GWHAAZE00000008mRNA1832703218327529+
GWHAAZE00000008exon1832703218327529+
GWHAAZE00000008CDS1832703218327529+
Transcript Sequence

Network for GWHGAAZE027367

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01241.19PSI_PSAK691591.50E-22
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K08905psaG Photosynthesis map00195

Gene Ontology

GO term OntologyName
GO:0015979biological_processphotosynthesis
GO:0009522cellular_componentphotosystem I
GO:0016020cellular_componentmembrane

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf711.152
SRR3591706second leaf3848.886
SRR3591707mature leaf2691.117
SRR3591708Shoot apex1358.516
SRR3591709Stem544.492
SRR3591710White floral bud97.936
SRR3591711White flower119.760
SRR3591712Green floral bud87.338
SRR3591713Yellow flower89.020
SRP173429 SRR8316895Juvenile bud stage 250.288
SRR8316896Juvenile bud stage 180.440
SRR8316897Juvenile bud stage 133.457
SRR8316894Third green stage 70.061
SRR8316900Third green stage 83.542
SRR8316901Third green stage 85.582
SRR8316898Complete white stage 14.143
SRR8316899Complete white stage 43.404
SRR8316903Complete white stage 28.481
SRR8316902Silver flowering stage4.306
SRR8316904Silver flowering stage10.596
SRR8316905Silver flowering stage2.070
SRR8316906Gold flowering stage 4.533
SRR8316907Gold flowering stage 4.464
SRR8316908Gold flowering stage 15.905
SRP132670SRR6706286Control118.197
SRR6706287Light intensity 50%76.386
SRR6706288Light intensity 20%68.654
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1260.861
CNS0095593Slightly white alabastrum(diploid) 2138.601
CNS0095594Slightly white alabastrum(diploid) 3178.101
CNS0095595Whole white alabastrum(diploid) 282.984
CNS0095596Whole white alabastrum(diploid) 379.375
CNS0095597Whole white alabastrum(diploid) 451.504
CNS0095598Silvery flower (diploied) 1293.481
CNS0095599Silvery flower (diploied) 2258.680
CNS0095600Silvery flower (diploied) 360.547
CNS0095601Golden flower (diploid) 1266.283
CNS0095602Golden flower (diploid) 2168.159
CNS0095603Golden flower (diploid) 3158.712
CNS0095604Slightly white alabastrum(tetraploid) 1185.459
CNS0095605Slightly white alabastrum(tetraploid) 2229.053
CNS0095606Slightly white alabastrum(tetraploid) 3317.028
CNS0095607Whole white alabastrum(tetraploid) 194.941
CNS0095608Whole white alabastrum(tetraploid) 272.995
CNS0095609Whole white alabastrum(tetraploid) 3105.203
CNS0095610Silvery flower (tetraploid) 185.227
CNS0095611Silvery flower (tetraploid) 2112.384
CNS0095612Silvery flower (tetraploid) 353.365
CNS0095613Golden flower (tetraploid) 136.862
CNS0095614Golden flower (tetraploid) 2115.857
CNS0095615Golden flower (tetraploid) 366.798
CRA001975CRR073297Stem 1314.507
CRR073298Stem 2253.439
CRR073299Stem 3494.372
CRR073300Leaf 144.272
CRR073301Leaf 272.763
CRR073302Leaf 366.461
CRR073303Juvenile bud 119.527
CRR073304Juvenile bud 217.054
CRR073305Juvenile bud 338.097
CRR073306Third green 12.674
CRR073307Third green 23.486
CRR073308Third green 313.012
CRR073309Second white 14.203
CRR073310Second white 24.616
CRR073311Second white 31.942
CRR073312Silver flowering 11.362
CRR073313Silver flowering 23.547
CRR073314Silver flowering 33.326
CRR073315Gold flowering 12290.746
CRR073316Gold flowering 21894.819
CRR073317Gold flowering 32710.892
CRR073318Tawny withering 1303.435
CRR073319Tawny withering 2242.263
CRR073320Tawny withering 3259.884