Detail information of GWHGAAZE027397


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010644915.11.94546E-93PREDICTED: molybdenum cofactor sulfurase isoform X3 [Vitis vinifera]
COGYP_290835.18E-14hypothetical protein Tfu_2779
Swissprottr|Q8LGM7|MOCOS_SOLLC7E-83Molybdenum cofactor sulfurase {ECO:0000255|HAMAP-Rule:MF_03050}
trEMBLtr|A0A061F8U0|A0A061F8U0_THECC7E-93Molybdenum cofactor sulfurase (LOS5) (ABA3) isoform 2 {ECO:0000313|EMBL:EOY13740.1}
TAIR10AT1G16540.15E-70molybdenum cofactor sulfurase (LOS5) (ABA3)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene1890760818910595-
GWHAAZE00000008mRNA1890760818910595-
GWHAAZE00000008exon1891052718910595-
GWHAAZE00000008exon1890932018909436-
GWHAAZE00000008exon1890871718908794-
GWHAAZE00000008exon1890850518908606-
GWHAAZE00000008exon1890794218908041-
GWHAAZE00000008exon1890760818907726-
GWHAAZE00000008CDS1891052718910595-
GWHAAZE00000008CDS1890932018909436-
GWHAAZE00000008CDS1890871718908794-
GWHAAZE00000008CDS1890850518908606-
GWHAAZE00000008CDS1890794218908041-
GWHAAZE00000008CDS1890760818907726-
Transcript Sequence

Network for GWHGAAZE027397

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15631ABA3 Folate biosynthesis map00790

Gene Ontology

GO term OntologyName
GO:0003824molecular_functioncatalytic activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf13.504
SRR3591706second leaf7.443
SRR3591707mature leaf18.502
SRR3591708Shoot apex7.756
SRR3591709Stem22.055
SRR3591710White floral bud14.869
SRR3591711White flower24.384
SRR3591712Green floral bud11.534
SRR3591713Yellow flower29.215
SRP173429 SRR8316895Juvenile bud stage 14.338
SRR8316896Juvenile bud stage 17.297
SRR8316897Juvenile bud stage 5.763
SRR8316894Third green stage 4.837
SRR8316900Third green stage 12.003
SRR8316901Third green stage 15.221
SRR8316898Complete white stage 5.101
SRR8316899Complete white stage 21.248
SRR8316903Complete white stage 8.945
SRR8316902Silver flowering stage8.236
SRR8316904Silver flowering stage10.273
SRR8316905Silver flowering stage5.690
SRR8316906Gold flowering stage 16.123
SRR8316907Gold flowering stage 15.397
SRR8316908Gold flowering stage 16.532
SRP132670SRR6706286Control10.349
SRR6706287Light intensity 50%8.915
SRR6706288Light intensity 20%8.807
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.990
CNS0095593Slightly white alabastrum(diploid) 24.869
CNS0095594Slightly white alabastrum(diploid) 35.690
CNS0095595Whole white alabastrum(diploid) 28.599
CNS0095596Whole white alabastrum(diploid) 33.329
CNS0095597Whole white alabastrum(diploid) 44.756
CNS0095598Silvery flower (diploied) 115.558
CNS0095599Silvery flower (diploied) 217.883
CNS0095600Silvery flower (diploied) 311.999
CNS0095601Golden flower (diploid) 113.500
CNS0095602Golden flower (diploid) 215.327
CNS0095603Golden flower (diploid) 316.521
CNS0095604Slightly white alabastrum(tetraploid) 16.722
CNS0095605Slightly white alabastrum(tetraploid) 25.984
CNS0095606Slightly white alabastrum(tetraploid) 312.120
CNS0095607Whole white alabastrum(tetraploid) 14.408
CNS0095608Whole white alabastrum(tetraploid) 22.260
CNS0095609Whole white alabastrum(tetraploid) 38.634
CNS0095610Silvery flower (tetraploid) 118.333
CNS0095611Silvery flower (tetraploid) 217.095
CNS0095612Silvery flower (tetraploid) 314.321
CNS0095613Golden flower (tetraploid) 19.118
CNS0095614Golden flower (tetraploid) 213.182
CNS0095615Golden flower (tetraploid) 313.432
CRA001975CRR073297Stem 17.891
CRR073298Stem 27.053
CRR073299Stem 35.336
CRR073300Leaf 16.767
CRR073301Leaf 27.062
CRR073302Leaf 33.990
CRR073303Juvenile bud 12.950
CRR073304Juvenile bud 22.638
CRR073305Juvenile bud 36.485
CRR073306Third green 11.381
CRR073307Third green 20.636
CRR073308Third green 31.827
CRR073309Second white 11.419
CRR073310Second white 24.390
CRR073311Second white 34.601
CRR073312Silver flowering 11.364
CRR073313Silver flowering 21.537
CRR073314Silver flowering 33.278
CRR073315Gold flowering 15.621
CRR073316Gold flowering 27.364
CRR073317Gold flowering 35.725
CRR073318Tawny withering 15.161
CRR073319Tawny withering 29.143
CRR073320Tawny withering 36.179