Detail information of GWHGAAZE027462


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007210891.11.6217E-99hypothetical protein PRUPE_ppa001838mg [Prunus persica]
Swissprottr|Q7XJU0|LHWL2_ARATH2E-36Transcription factor bHLH157
trEMBLtr|M5WZ47|M5WZ47_PRUPE6E-100Uncharacterized protein {ECO:0000313|EMBL:EMJ12090.1}
TAIR10AT2G27230.25E-33transcription factor-related

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene2019410620197754-
GWHAAZE00000008mRNA2019410620197754-
GWHAAZE00000008exon2019767520197754-
GWHAAZE00000008exon2019743320197512-
GWHAAZE00000008exon2019662820196687-
GWHAAZE00000008exon2019545920196432-
GWHAAZE00000008exon2019514320195244-
GWHAAZE00000008exon2019489420195034-
GWHAAZE00000008exon2019466020194791-
GWHAAZE00000008exon2019410620194433-
GWHAAZE00000008CDS2019767520197754-
GWHAAZE00000008CDS2019743320197512-
GWHAAZE00000008CDS2019662820196687-
GWHAAZE00000008CDS2019545920196432-
GWHAAZE00000008CDS2019514320195244-
GWHAAZE00000008CDS2019489420195034-
GWHAAZE00000008CDS2019466020194791-
GWHAAZE00000008CDS2019430820194433-
GWHAAZE00000008three_prime_UTR2019410620194307-
Transcript Sequence

Network for GWHGAAZE027462

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0040


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.054
SRR3591709Stem0.000
SRR3591710White floral bud0.045
SRR3591711White flower0.038
SRR3591712Green floral bud0.030
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 3.836
SRR8316896Juvenile bud stage 4.726
SRR8316897Juvenile bud stage 0.188
SRR8316894Third green stage 1.747
SRR8316900Third green stage 3.318
SRR8316901Third green stage 3.028
SRR8316898Complete white stage 0.815
SRR8316899Complete white stage 5.635
SRR8316903Complete white stage 2.794
SRR8316902Silver flowering stage2.405
SRR8316904Silver flowering stage2.345
SRR8316905Silver flowering stage0.781
SRR8316906Gold flowering stage 2.432
SRR8316907Gold flowering stage 2.477
SRR8316908Gold flowering stage 1.021
SRP132670SRR6706286Control2.336
SRR6706287Light intensity 50%2.965
SRR6706288Light intensity 20%2.549
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.095
CNS0095593Slightly white alabastrum(diploid) 25.480
CNS0095594Slightly white alabastrum(diploid) 33.964
CNS0095595Whole white alabastrum(diploid) 23.628
CNS0095596Whole white alabastrum(diploid) 33.166
CNS0095597Whole white alabastrum(diploid) 42.692
CNS0095598Silvery flower (diploied) 12.563
CNS0095599Silvery flower (diploied) 21.748
CNS0095600Silvery flower (diploied) 32.589
CNS0095601Golden flower (diploid) 13.611
CNS0095602Golden flower (diploid) 22.804
CNS0095603Golden flower (diploid) 32.513
CNS0095604Slightly white alabastrum(tetraploid) 10.461
CNS0095605Slightly white alabastrum(tetraploid) 20.156
CNS0095606Slightly white alabastrum(tetraploid) 30.207
CNS0095607Whole white alabastrum(tetraploid) 10.046
CNS0095608Whole white alabastrum(tetraploid) 20.054
CNS0095609Whole white alabastrum(tetraploid) 30.276
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.015
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.001
CRA001975CRR073297Stem 12.814
CRR073298Stem 22.205
CRR073299Stem 30.786
CRR073300Leaf 13.088
CRR073301Leaf 22.670
CRR073302Leaf 30.325
CRR073303Juvenile bud 10.443
CRR073304Juvenile bud 20.112
CRR073305Juvenile bud 31.201
CRR073306Third green 10.393
CRR073307Third green 20.084
CRR073308Third green 30.055
CRR073309Second white 10.082
CRR073310Second white 20.366
CRR073311Second white 30.137
CRR073312Silver flowering 10.088
CRR073313Silver flowering 20.711
CRR073314Silver flowering 30.065
CRR073315Gold flowering 10.361
CRR073316Gold flowering 20.880
CRR073317Gold flowering 30.239
CRR073318Tawny withering 12.555
CRR073319Tawny withering 21.980
CRR073320Tawny withering 31.561