Detail information of GWHGAAZE027531


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009621961.10PREDICTED: monodehydroascorbate reductase, chloroplastic isoform X1 [Nicotiana tomentosiformis]
COGYP_004543301.15E-37ferredoxin--NAD(+) reductase
Swissprottr|P92947|MDARP_ARATH0Monodehydroascorbate reductase, chloroplastic (Precursor)
trEMBLtr|B5AR71|B5AR71_9LAMI0Monodehydroascorbate reductase {ECO:0000313|EMBL:ACF93237.1}
TAIR10AT1G63940.40monodehydroascorbate reductase 6

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene2166586921671220-
GWHAAZE00000008mRNA2166586921671220-
GWHAAZE00000008exon2166586921665982-
GWHAAZE00000008exon2166621921666259-
GWHAAZE00000008exon2166653221666650-
GWHAAZE00000008exon2166675521666849-
GWHAAZE00000008exon2166714921667220-
GWHAAZE00000008exon2166740821667488-
GWHAAZE00000008exon2166767021667759-
GWHAAZE00000008exon2166864621668735-
GWHAAZE00000008exon2166889521668979-
GWHAAZE00000008exon2166908321669201-
GWHAAZE00000008exon2166996421670035-
GWHAAZE00000008exon2167024821670325-
GWHAAZE00000008exon2167061621670715-
GWHAAZE00000008exon2167105721671220-
GWHAAZE00000008CDS2167105721671220-
GWHAAZE00000008CDS2167061621670715-
GWHAAZE00000008CDS2167024821670325-
GWHAAZE00000008CDS2166996421670035-
GWHAAZE00000008CDS2166908321669201-
GWHAAZE00000008CDS2166889521668979-
GWHAAZE00000008CDS2166864621668735-
GWHAAZE00000008CDS2166767021667759-
GWHAAZE00000008CDS2166740821667488-
GWHAAZE00000008CDS2166714921667220-
GWHAAZE00000008CDS2166675521666849-
GWHAAZE00000008CDS2166653221666650-
GWHAAZE00000008CDS2166621921666259-
GWHAAZE00000008CDS2166586921665982-
Transcript Sequence

Network for GWHGAAZE027531

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07992.15Pyr_redox_2562289.50E-26
PF07992.15Pyr_redox_22363352.50E-15
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K08232E1.6.5.4 Metabolic pathways map01100
Ascorbate and aldarate metabolismmap00053

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0016491molecular_functionoxidoreductase activity
GO:0050660molecular_functionflavin adenine dinucleotide binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf26.331
SRR3591706second leaf25.297
SRR3591707mature leaf19.784
SRR3591708Shoot apex25.495
SRR3591709Stem19.707
SRR3591710White floral bud17.444
SRR3591711White flower38.856
SRR3591712Green floral bud21.876
SRR3591713Yellow flower16.612
SRP173429 SRR8316895Juvenile bud stage 36.310
SRR8316896Juvenile bud stage 55.334
SRR8316897Juvenile bud stage 23.879
SRR8316894Third green stage 22.261
SRR8316900Third green stage 78.724
SRR8316901Third green stage 62.106
SRR8316898Complete white stage 20.194
SRR8316899Complete white stage 52.217
SRR8316903Complete white stage 25.316
SRR8316902Silver flowering stage29.465
SRR8316904Silver flowering stage32.174
SRR8316905Silver flowering stage17.308
SRR8316906Gold flowering stage 53.880
SRR8316907Gold flowering stage 64.691
SRR8316908Gold flowering stage 62.178
SRP132670SRR6706286Control53.395
SRR6706287Light intensity 50%52.437
SRR6706288Light intensity 20%59.167
CNP0000432CNS0095592Slightly white alabastrum(diploid) 134.095
CNS0095593Slightly white alabastrum(diploid) 235.175
CNS0095594Slightly white alabastrum(diploid) 333.147
CNS0095595Whole white alabastrum(diploid) 229.786
CNS0095596Whole white alabastrum(diploid) 333.598
CNS0095597Whole white alabastrum(diploid) 422.281
CNS0095598Silvery flower (diploied) 1100.090
CNS0095599Silvery flower (diploied) 279.222
CNS0095600Silvery flower (diploied) 356.665
CNS0095601Golden flower (diploid) 150.874
CNS0095602Golden flower (diploid) 251.089
CNS0095603Golden flower (diploid) 349.930
CNS0095604Slightly white alabastrum(tetraploid) 138.288
CNS0095605Slightly white alabastrum(tetraploid) 229.144
CNS0095606Slightly white alabastrum(tetraploid) 334.739
CNS0095607Whole white alabastrum(tetraploid) 122.703
CNS0095608Whole white alabastrum(tetraploid) 219.201
CNS0095609Whole white alabastrum(tetraploid) 336.200
CNS0095610Silvery flower (tetraploid) 126.348
CNS0095611Silvery flower (tetraploid) 232.961
CNS0095612Silvery flower (tetraploid) 372.394
CNS0095613Golden flower (tetraploid) 114.663
CNS0095614Golden flower (tetraploid) 224.376
CNS0095615Golden flower (tetraploid) 319.458
CRA001975CRR073297Stem 164.745
CRR073298Stem 249.541
CRR073299Stem 353.100
CRR073300Leaf 138.809
CRR073301Leaf 246.758
CRR073302Leaf 359.242
CRR073303Juvenile bud 145.518
CRR073304Juvenile bud 235.428
CRR073305Juvenile bud 333.600
CRR073306Third green 119.413
CRR073307Third green 210.837
CRR073308Third green 315.901
CRR073309Second white 133.302
CRR073310Second white 243.089
CRR073311Second white 343.796
CRR073312Silver flowering 157.257
CRR073313Silver flowering 247.360
CRR073314Silver flowering 352.601
CRR073315Gold flowering 144.787
CRR073316Gold flowering 261.622
CRR073317Gold flowering 329.077
CRR073318Tawny withering 122.751
CRR073319Tawny withering 216.125
CRR073320Tawny withering 322.100