Detail information of GWHGAAZE027614


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011081021.10PREDICTED: serine/threonine-protein kinase EDR1 [Sesamum indicum]
COGYP_001958461.11E-35hypothetical protein Aasi_1443
Swissprottr|Q9FPR3|EDR1_ARATH4E-98Serine/threonine-protein kinase EDR1
trEMBLtr|V4VLX9|V4VLX9_9ROSI0Uncharacterized protein {ECO:0000313|EMBL:ESR53794.1}
TAIR10AT4G23050.16E-111PAS domain-containing protein tyrosine kinase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene2367795723697155-
GWHAAZE00000008mRNA2367795723697155-
GWHAAZE00000008exon2367795723678412-
GWHAAZE00000008exon2367919923679293-
GWHAAZE00000008exon2368005423680135-
GWHAAZE00000008exon2368123023681279-
GWHAAZE00000008exon2368185623681924-
GWHAAZE00000008exon2368228223682380-
GWHAAZE00000008exon2368289123682969-
GWHAAZE00000008exon2368366423683764-
GWHAAZE00000008exon2368385923683927-
GWHAAZE00000008exon2368403623684076-
GWHAAZE00000008exon2368522623685682-
GWHAAZE00000008exon2368649323686600-
GWHAAZE00000008exon2368668323686784-
GWHAAZE00000008exon2368720923687322-
GWHAAZE00000008exon2368757023687671-
GWHAAZE00000008exon2368779323688216-
GWHAAZE00000008exon2369686623697155-
GWHAAZE00000008CDS2369686623697155-
GWHAAZE00000008CDS2368779323688216-
GWHAAZE00000008CDS2368757023687671-
GWHAAZE00000008CDS2368720923687322-
GWHAAZE00000008CDS2368668323686784-
GWHAAZE00000008CDS2368649323686600-
GWHAAZE00000008CDS2368522623685682-
GWHAAZE00000008CDS2368403623684076-
GWHAAZE00000008CDS2368385923683927-
GWHAAZE00000008CDS2368366423683764-
GWHAAZE00000008CDS2368289123682969-
GWHAAZE00000008CDS2368228223682380-
GWHAAZE00000008CDS2368185623681924-
GWHAAZE00000008CDS2368123023681279-
GWHAAZE00000008CDS2368005423680135-
GWHAAZE00000008CDS2367919923679293-
GWHAAZE00000008CDS2367831023678412-
GWHAAZE00000008three_prime_UTR2367795723678309-
Transcript Sequence

Network for GWHGAAZE027614

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13426.8PAS_9911812.40E-14
PF07714.18PK_Tyr_Ser-Thr5247743.90E-65
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyTKL_CTR1-DRK-2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0005524molecular_functionATP binding
GO:0004672molecular_functionprotein kinase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.281
SRR3591706second leaf0.325
SRR3591707mature leaf0.500
SRR3591708Shoot apex0.964
SRR3591709Stem0.813
SRR3591710White floral bud0.222
SRR3591711White flower0.318
SRR3591712Green floral bud0.230
SRR3591713Yellow flower0.200
SRP173429 SRR8316895Juvenile bud stage 0.263
SRR8316896Juvenile bud stage 0.549
SRR8316897Juvenile bud stage 0.018
SRR8316894Third green stage 0.150
SRR8316900Third green stage 0.167
SRR8316901Third green stage 0.091
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.243
SRR8316903Complete white stage 0.030
SRR8316902Silver flowering stage0.018
SRR8316904Silver flowering stage0.025
SRR8316905Silver flowering stage0.031
SRR8316906Gold flowering stage 0.067
SRR8316907Gold flowering stage 0.029
SRR8316908Gold flowering stage 0.169
SRP132670SRR6706286Control0.213
SRR6706287Light intensity 50%0.091
SRR6706288Light intensity 20%0.106
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.225
CNS0095593Slightly white alabastrum(diploid) 20.082
CNS0095594Slightly white alabastrum(diploid) 30.089
CNS0095595Whole white alabastrum(diploid) 20.098
CNS0095596Whole white alabastrum(diploid) 30.072
CNS0095597Whole white alabastrum(diploid) 40.047
CNS0095598Silvery flower (diploied) 10.385
CNS0095599Silvery flower (diploied) 20.292
CNS0095600Silvery flower (diploied) 30.155
CNS0095601Golden flower (diploid) 10.455
CNS0095602Golden flower (diploid) 20.012
CNS0095603Golden flower (diploid) 30.130
CNS0095604Slightly white alabastrum(tetraploid) 10.097
CNS0095605Slightly white alabastrum(tetraploid) 20.011
CNS0095606Slightly white alabastrum(tetraploid) 30.152
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.120
CNS0095610Silvery flower (tetraploid) 10.346
CNS0095611Silvery flower (tetraploid) 20.051
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.041
CNS0095614Golden flower (tetraploid) 20.046
CNS0095615Golden flower (tetraploid) 30.046
CRA001975CRR073297Stem 10.328
CRR073298Stem 20.207
CRR073299Stem 30.038
CRR073300Leaf 10.168
CRR073301Leaf 20.099
CRR073302Leaf 30.053
CRR073303Juvenile bud 10.136
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.019
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.012
CRR073309Second white 10.000
CRR073310Second white 20.009
CRR073311Second white 30.036
CRR073312Silver flowering 10.028
CRR073313Silver flowering 20.002
CRR073314Silver flowering 30.018
CRR073315Gold flowering 10.034
CRR073316Gold flowering 20.155
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.085
CRR073319Tawny withering 20.032
CRR073320Tawny withering 30.050