Detail information of GWHGAAZE027681


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011029090.11.90005E-32PREDICTED: myeloid leukemia factor 1-like isoform X2 [Populus euphratica]
trEMBLtr|A9PH36|A9PH36_POPTR3E-32Uncharacterized protein {ECO:0000313|EMBL:ERP65276.1}
TAIR10AT4G22740.21E-13glycine-rich protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene2551436225514740+
GWHAAZE00000008mRNA2551436225514740+
GWHAAZE00000008exon2551436225514455+
GWHAAZE00000008exon2551455625514740+
GWHAAZE00000008CDS2551436225514455+
GWHAAZE00000008CDS2551455625514740+
Transcript Sequence

Network for GWHGAAZE027681

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0143


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf16.507
SRR3591706second leaf6.512
SRR3591707mature leaf8.367
SRR3591708Shoot apex9.140
SRR3591709Stem17.946
SRR3591710White floral bud16.116
SRR3591711White flower19.958
SRR3591712Green floral bud14.414
SRR3591713Yellow flower18.918
SRP173429 SRR8316895Juvenile bud stage 0.000
SRR8316896Juvenile bud stage 0.786
SRR8316897Juvenile bud stage 1.731
SRR8316894Third green stage 0.559
SRR8316900Third green stage 2.220
SRR8316901Third green stage 2.260
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.000
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control2.137
SRR6706287Light intensity 50%2.055
SRR6706288Light intensity 20%1.563
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.557
CNS0095593Slightly white alabastrum(diploid) 22.150
CNS0095594Slightly white alabastrum(diploid) 31.928
CNS0095595Whole white alabastrum(diploid) 24.353
CNS0095596Whole white alabastrum(diploid) 39.762
CNS0095597Whole white alabastrum(diploid) 49.898
CNS0095598Silvery flower (diploied) 10.000
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.000
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.000
CNS0095603Golden flower (diploid) 30.000
CNS0095604Slightly white alabastrum(tetraploid) 15.232
CNS0095605Slightly white alabastrum(tetraploid) 25.091
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 113.906
CNS0095608Whole white alabastrum(tetraploid) 219.665
CNS0095609Whole white alabastrum(tetraploid) 310.202
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.221
CNS0095612Silvery flower (tetraploid) 31.236
CNS0095613Golden flower (tetraploid) 10.082
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.125
CRA001975CRR073297Stem 10.558
CRR073298Stem 20.342
CRR073299Stem 30.000
CRR073300Leaf 12.641
CRR073301Leaf 20.519
CRR073302Leaf 30.659
CRR073303Juvenile bud 11.111
CRR073304Juvenile bud 20.126
CRR073305Juvenile bud 30.000
CRR073306Third green 10.000
CRR073307Third green 20.298
CRR073308Third green 30.155
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.061
CRR073313Silver flowering 20.158
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.226
CRR073320Tawny withering 30.000