Detail information of GWHGAAZE027682


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAEB54045.11.97809E-08hypothetical protein [Helianthus annuus]
trEMBLtr|F5ADV4|F5ADV4_HELAN0.000000007Putative uncharacterized protein {ECO:0000313|EMBL:AEB54045.1} (Fragment)
TAIR10AT2G45380.10.0002Without detailed annotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene2551503125517324+
GWHAAZE00000008mRNA2551503125517324+
GWHAAZE00000008exon2551503125515162+
GWHAAZE00000008exon2551562225515702+
GWHAAZE00000008exon2551721425517324+
GWHAAZE00000008CDS2551503125515162+
GWHAAZE00000008CDS2551562225515702+
GWHAAZE00000008CDS2551721425517324+
Transcript Sequence

Network for GWHGAAZE027682

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0143


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf8.559
SRR3591706second leaf2.594
SRR3591707mature leaf2.611
SRR3591708Shoot apex4.775
SRR3591709Stem8.230
SRR3591710White floral bud8.262
SRR3591711White flower9.166
SRR3591712Green floral bud6.783
SRR3591713Yellow flower9.168
SRP173429 SRR8316895Juvenile bud stage 0.000
SRR8316896Juvenile bud stage 0.915
SRR8316897Juvenile bud stage 0.352
SRR8316894Third green stage 0.267
SRR8316900Third green stage 1.890
SRR8316901Third green stage 1.934
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.000
SRR8316903Complete white stage 0.191
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control1.997
SRR6706287Light intensity 50%1.679
SRR6706288Light intensity 20%1.269
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.077
CNS0095593Slightly white alabastrum(diploid) 22.370
CNS0095594Slightly white alabastrum(diploid) 32.542
CNS0095595Whole white alabastrum(diploid) 22.961
CNS0095596Whole white alabastrum(diploid) 36.319
CNS0095597Whole white alabastrum(diploid) 45.019
CNS0095598Silvery flower (diploied) 10.000
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.000
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.062
CNS0095603Golden flower (diploid) 30.000
CNS0095604Slightly white alabastrum(tetraploid) 14.627
CNS0095605Slightly white alabastrum(tetraploid) 23.886
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 110.136
CNS0095608Whole white alabastrum(tetraploid) 210.420
CNS0095609Whole white alabastrum(tetraploid) 34.229
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.047
CNS0095612Silvery flower (tetraploid) 30.742
CNS0095613Golden flower (tetraploid) 10.089
CNS0095614Golden flower (tetraploid) 20.118
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.171
CRR073298Stem 20.669
CRR073299Stem 30.115
CRR073300Leaf 11.389
CRR073301Leaf 21.004
CRR073302Leaf 30.625
CRR073303Juvenile bud 11.220
CRR073304Juvenile bud 20.835
CRR073305Juvenile bud 30.000
CRR073306Third green 10.000
CRR073307Third green 20.146
CRR073308Third green 30.344
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.058
CRR073313Silver flowering 20.065
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.079
CRR073319Tawny withering 20.053
CRR073320Tawny withering 30.000