Detail information of GWHGAAZE027687


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009595836.10PREDICTED: geraniol 8-hydroxylase-like [Nicotiana tomentosiformis]
COGYP_004643624.18E-38cytochrome P450 hydroxylase
Swissprottr|Q9SD85|F3PH_ARATH2E-119Flavonoid 3'-monooxygenase
trEMBLtr|M1A0V4|M1A0V4_SOLTU0Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400012194}
TAIR10AT4G12300.12E-165cytochrome P450, family 706, subfamily A, polypeptide 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene2557951125583154-
GWHAAZE00000008mRNA2557951125583154-
GWHAAZE00000008exon2557951125580131-
GWHAAZE00000008exon2558225225583154-
GWHAAZE00000008CDS2558225225583154-
GWHAAZE00000008CDS2557951125580131-
Transcript Sequence

Network for GWHGAAZE027687

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00067.23p450404892.40E-102
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0005506molecular_functioniron ion binding
GO:0016705molecular_functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037molecular_functionheme binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf18.908
SRR3591706second leaf28.948
SRR3591707mature leaf54.074
SRR3591708Shoot apex16.322
SRR3591709Stem12.906
SRR3591710White floral bud305.940
SRR3591711White flower262.617
SRR3591712Green floral bud13.376
SRR3591713Yellow flower93.769
SRP173429 SRR8316895Juvenile bud stage 13.358
SRR8316896Juvenile bud stage 14.284
SRR8316897Juvenile bud stage 14.682
SRR8316894Third green stage 5.483
SRR8316900Third green stage 14.183
SRR8316901Third green stage 13.111
SRR8316898Complete white stage 52.838
SRR8316899Complete white stage 19.517
SRR8316903Complete white stage 70.882
SRR8316902Silver flowering stage118.978
SRR8316904Silver flowering stage133.652
SRR8316905Silver flowering stage80.891
SRR8316906Gold flowering stage 184.239
SRR8316907Gold flowering stage 134.251
SRR8316908Gold flowering stage 135.122
SRP132670SRR6706286Control24.155
SRR6706287Light intensity 50%21.227
SRR6706288Light intensity 20%17.247
CNP0000432CNS0095592Slightly white alabastrum(diploid) 113.248
CNS0095593Slightly white alabastrum(diploid) 213.017
CNS0095594Slightly white alabastrum(diploid) 312.011
CNS0095595Whole white alabastrum(diploid) 212.580
CNS0095596Whole white alabastrum(diploid) 39.254
CNS0095597Whole white alabastrum(diploid) 48.818
CNS0095598Silvery flower (diploied) 174.375
CNS0095599Silvery flower (diploied) 2108.590
CNS0095600Silvery flower (diploied) 3399.830
CNS0095601Golden flower (diploid) 1114.312
CNS0095602Golden flower (diploid) 2206.718
CNS0095603Golden flower (diploid) 3207.561
CNS0095604Slightly white alabastrum(tetraploid) 124.882
CNS0095605Slightly white alabastrum(tetraploid) 220.974
CNS0095606Slightly white alabastrum(tetraploid) 347.583
CNS0095607Whole white alabastrum(tetraploid) 115.030
CNS0095608Whole white alabastrum(tetraploid) 214.681
CNS0095609Whole white alabastrum(tetraploid) 331.512
CNS0095610Silvery flower (tetraploid) 1380.079
CNS0095611Silvery flower (tetraploid) 2506.398
CNS0095612Silvery flower (tetraploid) 31309.328
CNS0095613Golden flower (tetraploid) 1305.187
CNS0095614Golden flower (tetraploid) 2388.608
CNS0095615Golden flower (tetraploid) 3342.537
CRA001975CRR073297Stem 123.618
CRR073298Stem 221.909
CRR073299Stem 322.568
CRR073300Leaf 122.444
CRR073301Leaf 225.892
CRR073302Leaf 318.627
CRR073303Juvenile bud 114.550
CRR073304Juvenile bud 214.761
CRR073305Juvenile bud 323.023
CRR073306Third green 11072.751
CRR073307Third green 2552.180
CRR073308Third green 3695.253
CRR073309Second white 1626.191
CRR073310Second white 2598.032
CRR073311Second white 3374.331
CRR073312Silver flowering 189.720
CRR073313Silver flowering 259.659
CRR073314Silver flowering 365.813
CRR073315Gold flowering 159.434
CRR073316Gold flowering 286.681
CRR073317Gold flowering 370.079
CRR073318Tawny withering 171.052
CRR073319Tawny withering 251.864
CRR073320Tawny withering 341.122