Detail information of GWHGAAZE027688


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002303526.27.6152E-105myb family transcription factor family protein [Populus trichocarpa]
Swissprottr|Q50EX6|ODO1_PETHY1E-93Protein ODORANT1
trEMBLtr|B9GVR7|B9GVR7_POPTR3E-105Myb family transcription factor family protein {ECO:0000313|EMBL:EEE78505.2}
TAIR10AT4G22680.13E-73myb domain protein 85

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene2561236425613958-
GWHAAZE00000008mRNA2561236425613958-
GWHAAZE00000008exon2561369625613958-
GWHAAZE00000008exon2561236425612778-
GWHAAZE00000008CDS2561369625613958-
GWHAAZE00000008CDS2561236425612778-
Transcript Sequence

Network for GWHGAAZE027688

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.32Myb_DNA-binding14612.40E-13
PF00249.32Myb_DNA-binding711112.90E-14
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf2.913
SRR3591706second leaf2.967
SRR3591707mature leaf0.382
SRR3591708Shoot apex1.734
SRR3591709Stem83.844
SRR3591710White floral bud0.949
SRR3591711White flower0.431
SRR3591712Green floral bud1.899
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 9.599
SRR8316896Juvenile bud stage 8.081
SRR8316897Juvenile bud stage 2.200
SRR8316894Third green stage 1.430
SRR8316900Third green stage 4.006
SRR8316901Third green stage 3.918
SRR8316898Complete white stage 1.698
SRR8316899Complete white stage 4.705
SRR8316903Complete white stage 0.532
SRR8316902Silver flowering stage0.066
SRR8316904Silver flowering stage0.076
SRR8316905Silver flowering stage0.199
SRR8316906Gold flowering stage 0.179
SRR8316907Gold flowering stage 0.183
SRR8316908Gold flowering stage 0.561
SRP132670SRR6706286Control2.499
SRR6706287Light intensity 50%2.744
SRR6706288Light intensity 20%2.325
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.445
CNS0095593Slightly white alabastrum(diploid) 20.454
CNS0095594Slightly white alabastrum(diploid) 33.411
CNS0095595Whole white alabastrum(diploid) 21.021
CNS0095596Whole white alabastrum(diploid) 31.233
CNS0095597Whole white alabastrum(diploid) 41.283
CNS0095598Silvery flower (diploied) 10.043
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.258
CNS0095601Golden flower (diploid) 10.482
CNS0095602Golden flower (diploid) 20.109
CNS0095603Golden flower (diploid) 30.299
CNS0095604Slightly white alabastrum(tetraploid) 10.943
CNS0095605Slightly white alabastrum(tetraploid) 21.070
CNS0095606Slightly white alabastrum(tetraploid) 33.517
CNS0095607Whole white alabastrum(tetraploid) 10.208
CNS0095608Whole white alabastrum(tetraploid) 20.004
CNS0095609Whole white alabastrum(tetraploid) 32.634
CNS0095610Silvery flower (tetraploid) 10.203
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.002
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.338
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 113.659
CRR073298Stem 26.745
CRR073299Stem 35.367
CRR073300Leaf 11.622
CRR073301Leaf 20.877
CRR073302Leaf 32.938
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.225
CRR073306Third green 10.000
CRR073307Third green 20.177
CRR073308Third green 30.101
CRR073309Second white 10.022
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.140
CRR073316Gold flowering 20.309
CRR073317Gold flowering 30.546
CRR073318Tawny withering 113.957
CRR073319Tawny withering 26.789
CRR073320Tawny withering 311.683