Detail information of GWHGAAZE027699


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCAA47636.10soluble beta-fructosidase [Daucus carota]
COGYP_004640399.14E-43sucrose-6-phosphate hydrolase
Swissprottr|P29001|INVA_VIGRR0Acid beta-fructofuranosidase 38 kDa subunit (Precursor)
trEMBLtr|Q42722|Q42722_DAUCA0Soluble beta-fructosidase {ECO:0000313|EMBL:CAA47636.1}
TAIR10AT1G12240.10Glycosyl hydrolases family 32 protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene2576902325776273-
GWHAAZE00000008mRNA2576902325776273-
GWHAAZE00000008exon2576902325769295-
GWHAAZE00000008exon2576966225769749-
GWHAAZE00000008exon2577155925771794-
GWHAAZE00000008exon2577296125773122-
GWHAAZE00000008exon2577349125774350-
GWHAAZE00000008exon2577597925776273-
GWHAAZE00000008CDS2577597925776273-
GWHAAZE00000008CDS2577349125774350-
GWHAAZE00000008CDS2577296125773122-
GWHAAZE00000008CDS2577155925771794-
GWHAAZE00000008CDS2576966225769749-
GWHAAZE00000008CDS2576902325769295-
Transcript Sequence

Network for GWHGAAZE027699

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF11837.9DUF335713996.60E-08
PF00251.21Glyco_hydro_32N1004056.20E-92
PF08244.13Glyco_hydro_32C4085998.10E-31
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01193INV, sacA Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Galactose metabolismmap00052
Starch and sucrose metabolismmap00500

Gene Ontology

GO term OntologyName
GO:0005975biological_processcarbohydrate metabolic process
GO:0004564molecular_functionbeta-fructofuranosidase activity
GO:0004575molecular_functionsucrose alpha-glucosidase activity
GO:0004553molecular_functionhydrolase activity, hydrolyzing O-glycosyl compounds

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf13.914
SRR3591706second leaf0.202
SRR3591707mature leaf0.077
SRR3591708Shoot apex0.433
SRR3591709Stem2.387
SRR3591710White floral bud72.160
SRR3591711White flower64.900
SRR3591712Green floral bud184.259
SRR3591713Yellow flower20.976
SRP173429 SRR8316895Juvenile bud stage 1.562
SRR8316896Juvenile bud stage 2.532
SRR8316897Juvenile bud stage 0.406
SRR8316894Third green stage 8.046
SRR8316900Third green stage 127.253
SRR8316901Third green stage 113.789
SRR8316898Complete white stage 51.220
SRR8316899Complete white stage 32.410
SRR8316903Complete white stage 70.302
SRR8316902Silver flowering stage47.599
SRR8316904Silver flowering stage54.606
SRR8316905Silver flowering stage16.332
SRR8316906Gold flowering stage 17.839
SRR8316907Gold flowering stage 38.730
SRR8316908Gold flowering stage 5.921
SRP132670SRR6706286Control72.685
SRR6706287Light intensity 50%71.607
SRR6706288Light intensity 20%66.219
CNP0000432CNS0095592Slightly white alabastrum(diploid) 121.042
CNS0095593Slightly white alabastrum(diploid) 220.495
CNS0095594Slightly white alabastrum(diploid) 38.556
CNS0095595Whole white alabastrum(diploid) 2134.835
CNS0095596Whole white alabastrum(diploid) 3173.452
CNS0095597Whole white alabastrum(diploid) 4157.767
CNS0095598Silvery flower (diploied) 117.163
CNS0095599Silvery flower (diploied) 220.153
CNS0095600Silvery flower (diploied) 344.327
CNS0095601Golden flower (diploid) 18.216
CNS0095602Golden flower (diploid) 211.897
CNS0095603Golden flower (diploid) 313.244
CNS0095604Slightly white alabastrum(tetraploid) 164.470
CNS0095605Slightly white alabastrum(tetraploid) 257.281
CNS0095606Slightly white alabastrum(tetraploid) 32.623
CNS0095607Whole white alabastrum(tetraploid) 1241.115
CNS0095608Whole white alabastrum(tetraploid) 2293.978
CNS0095609Whole white alabastrum(tetraploid) 3148.295
CNS0095610Silvery flower (tetraploid) 144.346
CNS0095611Silvery flower (tetraploid) 26.289
CNS0095612Silvery flower (tetraploid) 34.033
CNS0095613Golden flower (tetraploid) 12.830
CNS0095614Golden flower (tetraploid) 24.490
CNS0095615Golden flower (tetraploid) 32.719
CRA001975CRR073297Stem 12.945
CRR073298Stem 23.912
CRR073299Stem 32.670
CRR073300Leaf 178.506
CRR073301Leaf 261.601
CRR073302Leaf 333.782
CRR073303Juvenile bud 174.357
CRR073304Juvenile bud 279.033
CRR073305Juvenile bud 327.376
CRR073306Third green 176.857
CRR073307Third green 297.029
CRR073308Third green 366.631
CRR073309Second white 113.454
CRR073310Second white 27.691
CRR073311Second white 34.228
CRR073312Silver flowering 111.763
CRR073313Silver flowering 213.186
CRR073314Silver flowering 36.833
CRR073315Gold flowering 18.412
CRR073316Gold flowering 21.668
CRR073317Gold flowering 36.935
CRR073318Tawny withering 18.259
CRR073319Tawny withering 28.777
CRR073320Tawny withering 37.330