Gene detail

Detail information of GWHGAAZE027731

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_009799218.1	0	PREDICTED: putative glucuronosyltransferase PGSIP8 [Nicotiana sylvestris]
COG	YP_002525241.1	3E-15	glycosyl transferase family protein
Swissprot	tr\|F4JMI5\|GUX7_ARATH	0	Putative glucuronosyltransferase PGSIP7
trEMBL	tr\|M1A0R9\|M1A0R9_SOLTU	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:PGSC0003DMT400012126}
TAIR10	AT4G16600.1	0	Nucleotide-diphospho-sugar transferases superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	26267560	26275214	+
GWHAAZE00000008	mRNA	26267560	26275214	+
GWHAAZE00000008	exon	26267560	26268040	+
GWHAAZE00000008	exon	26272195	26272453	+
GWHAAZE00000008	exon	26273065	26273266	+
GWHAAZE00000008	exon	26273648	26273795	+
GWHAAZE00000008	exon	26274420	26275214	+
GWHAAZE00000008	five_prime_UTR	26267560	26267768	+
GWHAAZE00000008	CDS	26267769	26268040	+
GWHAAZE00000008	CDS	26272195	26272453	+
GWHAAZE00000008	CDS	26273065	26273266	+
GWHAAZE00000008	CDS	26273648	26273795	+
GWHAAZE00000008	CDS	26274420	26274960	+
GWHAAZE00000008	three_prime_UTR	26274961	26275214	+

Transcript Sequence
>GWHTAAZE027765 ACACATAGAAACTCTTTCTCTATCTATATATATACACACAATACACAACGCATACTCATCGAGCTCCAATCCTTGATAGAAACCCGTTTTGCTCTGTTTCTACCGCTCGAACAGAATCAATTTTCGCCGGCGGCAACAGTTGGTTTGGCCGGCGGGGAGATTCACCTGACCGGCGTTGATCGGAAAATGCGATAGAGAGAGAGAGAGTAATGGATTGGATGAACAAGAGGAAGGTATTTGCTATTGTGAGTGTTTTATTGTGGTTTATATTGTTATCAATCGAAGCGACGTCGTCAGGTAATGGAGGGGGAGGCAAGTACAGGAATGCTTATGCAACGATGATGTACATGGGAACGCCGAGGGACTACGAGTTCTACGTGGCGACACGTGTCATGCTCAGATCTCTCTCCAATCTCGGCGTCGAAGCCGATCTCGTCGTCATTGCGTCCGTCGACGTTCCTCTCCATTGGCTCCGTGCTCTGGAAGAAGAAGATGGGGCAAAAGTGGTGAGAGTTGAGAATCTAAACAATCCATACAAGGGGCAACCCAATTTTAACAAAAGATTCAAATTGACACTAAACAAGCTATATGCATGGAGCCTGGTGAACTATGAGAGAGTGGTTATGCTTGATTCAGACAATCTCTTCCTTAGAAAAACAGATGAGTTGTTTCAATGTGGCCAGTTTTGTGCTGTCTTCATTAACCCCTGCATCTTTCACACTGGCCTCTTTGTATTACAGCCATCAATGGAGGTATTCAAGAATATGATACATGAGTTGGAGAGTGGGAGAGAGAATCCAGATGGTGCAGACCAAGGTTTTCTAGGAAGCTACTTCCCAGATTTGCTTGATCAGCCAATGTTCCATCCTCCCCTTAATGGCACCAAGCTTCTTGGTACCTTTAGGCTTCCTCTCAGCTACCAAATGGATGCTTCTTATTACTATCTGAGACTGCGATGGAGTGTACCATGTGGACAACACAGTGTGATAACATTCCCAGGTGCACCATGGCTAAAACCATGGTATTGGTGGGCATGGCCAGTCCTCCCTCTAGGCCTCCAATGGCATGAACAAAGACGCCAAACTCTTGGGTACGGAGCAGAGATTCCTCTTTTATTGATCCAATCTCTCCTATATATAGGAATAGTTACCGTCACTCGTCTGGCCAGGCCTAACTTATCAAAACTCTGCTATCGCCGCACAGACAAAAGCACTCTTTTCCTCCAGACCAGCCTCAAAATGCTTGTTATATCCTCCATTCTGGCCGCCTACACGGTCCCCTTTTTCCTCATCCCTCGCACTATCCACCCATTACTTGGTTGGGCCCTTTACTTCTTAGGTGCTTTTGCACTTTCCTCTATAGCTGTCAATGCTTTCCTCCTCCCAATGTTGCCAGTTCTGACGCTCTGGTTTGGAAGCCTAGGCGCCCTCTTGGTCATGGCTTTTCCTTGGTACCCTGATGGGGTCGTCAGAGCTCTGGCTGTGTTTGGATATGCGTTTTGTAGTGCCCCAGTCGTGTGGGCCTCCTTGGTCAGAGTTGTGTCTTGTCTTCAGGTTTCGCTTGAGAGGGAGGCTTTCTTGCCTAGGTTGGGTGAGTCAACAACACTGCCAGGATTTAACAAGCTATATTAAGAAAAAAAAATGGCGAGATGAAATTTTGAGGTTTTTGACTTGTTCAAGGTACCTATTGCTTCTTGTCTGCTATTCATCTATATGGACAATTAATTAGAAGCAAGTGAGAATTGGGATGGTGAATGCTTCATTTTGTAGTGGGGGAACATATTGTAATTCTGATTACTGGGACAGTTCCAGAAATGTAGCTTTATTGGTACTGTGATTTATTATATAGAAAGATGGATACAAGCGAAGAATTTGATTGATTAAAA

Network for GWHGAAZE027731

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0122

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	1.602
	SRR3591706	second leaf	0.339
	SRR3591707	mature leaf	0.221
	SRR3591708	Shoot apex	3.044
	SRR3591709	Stem	2.864
	SRR3591710	White floral bud	1.713
	SRR3591711	White flower	1.018
	SRR3591712	Green floral bud	5.488
	SRR3591713	Yellow flower	0.157
SRP173429	SRR8316895	Juvenile bud stage	1.434
	SRR8316896	Juvenile bud stage	2.209
	SRR8316897	Juvenile bud stage	1.725
	SRR8316894	Third green stage	1.183
	SRR8316900	Third green stage	2.216
	SRR8316901	Third green stage	2.244
	SRR8316898	Complete white stage	1.245
	SRR8316899	Complete white stage	6.991
	SRR8316903	Complete white stage	1.311
	SRR8316902	Silver flowering stage	2.136
	SRR8316904	Silver flowering stage	3.045
	SRR8316905	Silver flowering stage	0.951
	SRR8316906	Gold flowering stage	1.605
	SRR8316907	Gold flowering stage	2.666
	SRR8316908	Gold flowering stage	3.462
SRP132670	SRR6706286	Control	1.148
	SRR6706287	Light intensity 50%	1.589
	SRR6706288	Light intensity 20%	1.637
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.844
	CNS0095593	Slightly white alabastrum(diploid) 2	2.731
	CNS0095594	Slightly white alabastrum(diploid) 3	1.842
	CNS0095595	Whole white alabastrum(diploid) 2	2.851
	CNS0095596	Whole white alabastrum(diploid) 3	1.007
	CNS0095597	Whole white alabastrum(diploid) 4	2.707
	CNS0095598	Silvery flower (diploied) 1	3.066
	CNS0095599	Silvery flower (diploied) 2	1.188
	CNS0095600	Silvery flower (diploied) 3	1.485
	CNS0095601	Golden flower (diploid) 1	1.560
	CNS0095602	Golden flower (diploid) 2	2.235
	CNS0095603	Golden flower (diploid) 3	2.047
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.531
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.833
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.875
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.924
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.358
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.301
	CNS0095610	Silvery flower (tetraploid) 1	0.104
	CNS0095611	Silvery flower (tetraploid) 2	0.231
	CNS0095612	Silvery flower (tetraploid) 3	0.540
	CNS0095613	Golden flower (tetraploid) 1	0.398
	CNS0095614	Golden flower (tetraploid) 2	0.201
	CNS0095615	Golden flower (tetraploid) 3	0.941
CRA001975	CRR073297	Stem 1	3.418
	CRR073298	Stem 2	3.997
	CRR073299	Stem 3	4.329
	CRR073300	Leaf 1	4.875
	CRR073301	Leaf 2	5.234
	CRR073302	Leaf 3	5.015
	CRR073303	Juvenile bud 1	4.407
	CRR073304	Juvenile bud 2	2.283
	CRR073305	Juvenile bud 3	4.999
	CRR073306	Third green 1	0.276
	CRR073307	Third green 2	0.139
	CRR073308	Third green 3	0.425
	CRR073309	Second white 1	0.778
	CRR073310	Second white 2	0.137
	CRR073311	Second white 3	0.564
	CRR073312	Silver flowering 1	2.757
	CRR073313	Silver flowering 2	3.288
	CRR073314	Silver flowering 3	3.200
	CRR073315	Gold flowering 1	2.109
	CRR073316	Gold flowering 2	3.753
	CRR073317	Gold flowering 3	3.265
	CRR073318	Tawny withering 1	20.424
	CRR073319	Tawny withering 2	18.708
	CRR073320	Tawny withering 3	21.348