Detail information of GWHGAAZE027759


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrADJ67442.17.80087E-59ethylene response factor 13 [Actinidia deliciosa]
Swissprottr|Q8VZ91|EF103_ARATH2E-46Ethylene-responsive transcription factor 6
trEMBLtr|D8VD40|D8VD40_ACTDE3E-59Ethylene response factor 13 {ECO:0000313|EMBL:ADJ67442.1}
TAIR10AT4G17490.13E-31ethylene responsive element binding factor 6

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene2713169127132626-
GWHAAZE00000008mRNA2713169127132626-
GWHAAZE00000008exon2713230327132626-
GWHAAZE00000008exon2713169127132272-
GWHAAZE00000008CDS2713230327132626-
GWHAAZE00000008CDS2713169127132272-
Transcript Sequence

Network for GWHGAAZE027759

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0150


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00847.21AP21201701.70E-13
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAP2/ERF-ERF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355biological_processregulation of transcription, DNA-templated
GO:0003700molecular_functionDNA-binding transcription factor activity
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf78.857
SRR3591706second leaf38.971
SRR3591707mature leaf12.149
SRR3591708Shoot apex94.774
SRR3591709Stem80.559
SRR3591710White floral bud29.733
SRR3591711White flower35.743
SRR3591712Green floral bud17.324
SRR3591713Yellow flower1.998
SRP173429 SRR8316895Juvenile bud stage 48.196
SRR8316896Juvenile bud stage 14.518
SRR8316897Juvenile bud stage 18.214
SRR8316894Third green stage 25.363
SRR8316900Third green stage 25.998
SRR8316901Third green stage 32.827
SRR8316898Complete white stage 0.625
SRR8316899Complete white stage 52.732
SRR8316903Complete white stage 1.804
SRR8316902Silver flowering stage0.565
SRR8316904Silver flowering stage0.695
SRR8316905Silver flowering stage1.030
SRR8316906Gold flowering stage 5.797
SRR8316907Gold flowering stage 4.126
SRR8316908Gold flowering stage 3.054
SRP132670SRR6706286Control6.812
SRR6706287Light intensity 50%6.859
SRR6706288Light intensity 20%4.860
CNP0000432CNS0095592Slightly white alabastrum(diploid) 118.390
CNS0095593Slightly white alabastrum(diploid) 228.259
CNS0095594Slightly white alabastrum(diploid) 326.490
CNS0095595Whole white alabastrum(diploid) 28.376
CNS0095596Whole white alabastrum(diploid) 33.648
CNS0095597Whole white alabastrum(diploid) 48.342
CNS0095598Silvery flower (diploied) 166.606
CNS0095599Silvery flower (diploied) 244.199
CNS0095600Silvery flower (diploied) 321.527
CNS0095601Golden flower (diploid) 180.672
CNS0095602Golden flower (diploid) 223.986
CNS0095603Golden flower (diploid) 323.337
CNS0095604Slightly white alabastrum(tetraploid) 10.682
CNS0095605Slightly white alabastrum(tetraploid) 20.723
CNS0095606Slightly white alabastrum(tetraploid) 31.386
CNS0095607Whole white alabastrum(tetraploid) 11.758
CNS0095608Whole white alabastrum(tetraploid) 20.361
CNS0095609Whole white alabastrum(tetraploid) 30.427
CNS0095610Silvery flower (tetraploid) 13.204
CNS0095611Silvery flower (tetraploid) 21.588
CNS0095612Silvery flower (tetraploid) 37.873
CNS0095613Golden flower (tetraploid) 10.936
CNS0095614Golden flower (tetraploid) 21.385
CNS0095615Golden flower (tetraploid) 30.328
CRA001975CRR073297Stem 138.140
CRR073298Stem 255.960
CRR073299Stem 383.496
CRR073300Leaf 189.871
CRR073301Leaf 2111.519
CRR073302Leaf 3106.891
CRR073303Juvenile bud 186.186
CRR073304Juvenile bud 250.448
CRR073305Juvenile bud 3125.555
CRR073306Third green 14.209
CRR073307Third green 24.200
CRR073308Third green 36.054
CRR073309Second white 10.304
CRR073310Second white 20.489
CRR073311Second white 30.725
CRR073312Silver flowering 10.491
CRR073313Silver flowering 20.844
CRR073314Silver flowering 30.922
CRR073315Gold flowering 135.261
CRR073316Gold flowering 225.180
CRR073317Gold flowering 363.709
CRR073318Tawny withering 124.165
CRR073319Tawny withering 223.820
CRR073320Tawny withering 349.752