Detail information of GWHGAAZE027765


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP39933.12.9446E-143hypothetical protein JCGZ_03464 [Jatropha curcas]
COGYP_008431664.11E-24hypothetical protein N186_01315
Swissprottr|Q05737|YPTM2_MAIZE2E-135GTP-binding protein YPTM2
trEMBLtr|A0A067KY70|A0A067KY70_JATCU1E-143Uncharacterized protein {ECO:0000313|EMBL:KDP39933.1}
TAIR10AT1G02130.12E-106RAS 5

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene2753228627536612-
GWHAAZE00000008mRNA2753228627536612-
GWHAAZE00000008exon2753228627532614-
GWHAAZE00000008exon2753358427533687-
GWHAAZE00000008exon2753394527534100-
GWHAAZE00000008exon2753455227534623-
GWHAAZE00000008exon2753489127534938-
GWHAAZE00000008exon2753501827535065-
GWHAAZE00000008exon2753544827535520-
GWHAAZE00000008exon2753659927536612-
GWHAAZE00000008CDS2753659927536612-
GWHAAZE00000008CDS2753544827535520-
GWHAAZE00000008CDS2753501827535065-
GWHAAZE00000008CDS2753489127534938-
GWHAAZE00000008CDS2753455227534623-
GWHAAZE00000008CDS2753394527534100-
GWHAAZE00000008CDS2753358427533687-
GWHAAZE00000008CDS2753251827532614-
GWHAAZE00000008three_prime_UTR2753228627532517-
Transcript Sequence

Network for GWHGAAZE027765

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00071.23Ras101704.20E-67
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K07874RAB1A Autophagy - animal map04140

Gene Ontology

GO term OntologyName
GO:0005525molecular_functionGTP binding
GO:0003924molecular_functionGTPase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf108.841
SRR3591706second leaf107.179
SRR3591707mature leaf60.908
SRR3591708Shoot apex81.159
SRR3591709Stem110.647
SRR3591710White floral bud137.830
SRR3591711White flower119.725
SRR3591712Green floral bud160.943
SRR3591713Yellow flower132.961
SRP173429 SRR8316895Juvenile bud stage 37.668
SRR8316896Juvenile bud stage 62.077
SRR8316897Juvenile bud stage 26.473
SRR8316894Third green stage 27.629
SRR8316900Third green stage 98.158
SRR8316901Third green stage 99.396
SRR8316898Complete white stage 48.416
SRR8316899Complete white stage 140.381
SRR8316903Complete white stage 67.245
SRR8316902Silver flowering stage41.964
SRR8316904Silver flowering stage48.039
SRR8316905Silver flowering stage25.257
SRR8316906Gold flowering stage 101.317
SRR8316907Gold flowering stage 81.476
SRR8316908Gold flowering stage 102.092
SRP132670SRR6706286Control22.049
SRR6706287Light intensity 50%27.611
SRR6706288Light intensity 20%32.059
CNP0000432CNS0095592Slightly white alabastrum(diploid) 199.757
CNS0095593Slightly white alabastrum(diploid) 2128.891
CNS0095594Slightly white alabastrum(diploid) 3107.527
CNS0095595Whole white alabastrum(diploid) 2135.045
CNS0095596Whole white alabastrum(diploid) 3136.630
CNS0095597Whole white alabastrum(diploid) 4151.332
CNS0095598Silvery flower (diploied) 162.528
CNS0095599Silvery flower (diploied) 266.638
CNS0095600Silvery flower (diploied) 386.801
CNS0095601Golden flower (diploid) 164.792
CNS0095602Golden flower (diploid) 279.666
CNS0095603Golden flower (diploid) 369.847
CNS0095604Slightly white alabastrum(tetraploid) 1125.880
CNS0095605Slightly white alabastrum(tetraploid) 2113.699
CNS0095606Slightly white alabastrum(tetraploid) 3120.569
CNS0095607Whole white alabastrum(tetraploid) 1155.749
CNS0095608Whole white alabastrum(tetraploid) 2173.809
CNS0095609Whole white alabastrum(tetraploid) 3126.736
CNS0095610Silvery flower (tetraploid) 1102.209
CNS0095611Silvery flower (tetraploid) 282.578
CNS0095612Silvery flower (tetraploid) 385.496
CNS0095613Golden flower (tetraploid) 1112.970
CNS0095614Golden flower (tetraploid) 2109.880
CNS0095615Golden flower (tetraploid) 382.837
CRA001975CRR073297Stem 139.439
CRR073298Stem 238.601
CRR073299Stem 343.484
CRR073300Leaf 162.529
CRR073301Leaf 258.585
CRR073302Leaf 351.904
CRR073303Juvenile bud 173.664
CRR073304Juvenile bud 268.548
CRR073305Juvenile bud 347.157
CRR073306Third green 151.340
CRR073307Third green 260.949
CRR073308Third green 349.033
CRR073309Second white 168.523
CRR073310Second white 259.625
CRR073311Second white 339.701
CRR073312Silver flowering 139.936
CRR073313Silver flowering 244.267
CRR073314Silver flowering 329.147
CRR073315Gold flowering 136.844
CRR073316Gold flowering 231.065
CRR073317Gold flowering 330.726
CRR073318Tawny withering 154.109
CRR073319Tawny withering 259.697
CRR073320Tawny withering 357.804