Detail information of GWHGAAZE027836


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_004245882.16.9768E-164PREDICTED: eyes absent homolog 2 [Solanum lycopersicum]
trEMBLtr|K4CN69|K4CN69_SOLLC3E-164Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc08g077090.2.1}
TAIR10AT2G35320.13E-110EYES ABSENT homolog

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene2928898629293778+
GWHAAZE00000008mRNA2928898629293778+
GWHAAZE00000008exon2928898629289174+
GWHAAZE00000008exon2928959629289763+
GWHAAZE00000008exon2929095829291051+
GWHAAZE00000008exon2929190829292051+
GWHAAZE00000008exon2929340429293778+
GWHAAZE00000008CDS2928898629289174+
GWHAAZE00000008CDS2928959629289763+
GWHAAZE00000008CDS2929095829291051+
GWHAAZE00000008CDS2929190829292051+
GWHAAZE00000008CDS2929340429293681+
GWHAAZE00000008three_prime_UTR2929368229293778+
Transcript Sequence

Network for GWHGAAZE027836

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0291


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0007275biological_processmulticellular organism development

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf13.516
SRR3591706second leaf9.648
SRR3591707mature leaf10.430
SRR3591708Shoot apex11.962
SRR3591709Stem18.251
SRR3591710White floral bud11.165
SRR3591711White flower23.335
SRR3591712Green floral bud16.672
SRR3591713Yellow flower13.184
SRP173429 SRR8316895Juvenile bud stage 12.182
SRR8316896Juvenile bud stage 14.872
SRR8316897Juvenile bud stage 7.222
SRR8316894Third green stage 8.481
SRR8316900Third green stage 27.428
SRR8316901Third green stage 27.653
SRR8316898Complete white stage 9.868
SRR8316899Complete white stage 34.158
SRR8316903Complete white stage 13.363
SRR8316902Silver flowering stage14.856
SRR8316904Silver flowering stage23.395
SRR8316905Silver flowering stage10.710
SRR8316906Gold flowering stage 28.442
SRR8316907Gold flowering stage 26.774
SRR8316908Gold flowering stage 27.701
SRP132670SRR6706286Control7.879
SRR6706287Light intensity 50%7.066
SRR6706288Light intensity 20%7.934
CNP0000432CNS0095592Slightly white alabastrum(diploid) 118.015
CNS0095593Slightly white alabastrum(diploid) 215.281
CNS0095594Slightly white alabastrum(diploid) 316.456
CNS0095595Whole white alabastrum(diploid) 219.602
CNS0095596Whole white alabastrum(diploid) 316.214
CNS0095597Whole white alabastrum(diploid) 417.753
CNS0095598Silvery flower (diploied) 127.609
CNS0095599Silvery flower (diploied) 230.539
CNS0095600Silvery flower (diploied) 343.090
CNS0095601Golden flower (diploid) 129.053
CNS0095602Golden flower (diploid) 235.658
CNS0095603Golden flower (diploid) 331.683
CNS0095604Slightly white alabastrum(tetraploid) 115.149
CNS0095605Slightly white alabastrum(tetraploid) 212.775
CNS0095606Slightly white alabastrum(tetraploid) 317.651
CNS0095607Whole white alabastrum(tetraploid) 18.564
CNS0095608Whole white alabastrum(tetraploid) 212.392
CNS0095609Whole white alabastrum(tetraploid) 316.056
CNS0095610Silvery flower (tetraploid) 141.674
CNS0095611Silvery flower (tetraploid) 241.749
CNS0095612Silvery flower (tetraploid) 320.443
CNS0095613Golden flower (tetraploid) 125.571
CNS0095614Golden flower (tetraploid) 245.858
CNS0095615Golden flower (tetraploid) 318.082
CRA001975CRR073297Stem 17.160
CRR073298Stem 25.283
CRR073299Stem 35.013
CRR073300Leaf 16.829
CRR073301Leaf 27.487
CRR073302Leaf 34.755
CRR073303Juvenile bud 16.611
CRR073304Juvenile bud 26.622
CRR073305Juvenile bud 36.338
CRR073306Third green 13.179
CRR073307Third green 22.981
CRR073308Third green 34.377
CRR073309Second white 14.053
CRR073310Second white 25.038
CRR073311Second white 35.091
CRR073312Silver flowering 12.467
CRR073313Silver flowering 23.374
CRR073314Silver flowering 31.881
CRR073315Gold flowering 14.458
CRR073316Gold flowering 24.778
CRR073317Gold flowering 35.061
CRR073318Tawny withering 18.138
CRR073319Tawny withering 29.018
CRR073320Tawny withering 35.110