Detail information of GWHGAAZE027849


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002280253.10PREDICTED: transcription factor MYC2-like [Vitis vinifera]
Swissprottr|Q39204|MYC2_ARATH0Transcription factor MYC2
trEMBLtr|F6HT90|F6HT90_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB57900.1}
TAIR10AT1G32640.14E-149Basic helix-loop-helix (bHLH) DNA-binding family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene3003573830038649-
GWHAAZE00000008mRNA3003573830038649-
GWHAAZE00000008exon3003573830037342-
GWHAAZE00000008exon3003826630038649-
GWHAAZE00000008CDS3003826630038649-
GWHAAZE00000008CDS3003573830037342-
Transcript Sequence

Network for GWHGAAZE027849

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14215.7bHLH-MYC_N742567.90E-53
PF00010.27HLH4875321.40E-10
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybHLH

KEGG pathway

KO Enzyme pathway mapID
K13422MYC2 MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075

Gene Ontology

GO term OntologyName
GO:0046983molecular_functionprotein dimerization activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf35.229
SRR3591706second leaf57.500
SRR3591707mature leaf153.528
SRR3591708Shoot apex43.486
SRR3591709Stem31.690
SRR3591710White floral bud38.479
SRR3591711White flower43.759
SRR3591712Green floral bud48.376
SRR3591713Yellow flower32.019
SRP173429 SRR8316895Juvenile bud stage 12.193
SRR8316896Juvenile bud stage 15.471
SRR8316897Juvenile bud stage 5.813
SRR8316894Third green stage 11.706
SRR8316900Third green stage 33.497
SRR8316901Third green stage 34.211
SRR8316898Complete white stage 11.294
SRR8316899Complete white stage 67.968
SRR8316903Complete white stage 27.815
SRR8316902Silver flowering stage13.367
SRR8316904Silver flowering stage15.102
SRR8316905Silver flowering stage7.807
SRR8316906Gold flowering stage 28.507
SRR8316907Gold flowering stage 27.269
SRR8316908Gold flowering stage 27.025
SRP132670SRR6706286Control37.534
SRR6706287Light intensity 50%36.893
SRR6706288Light intensity 20%37.500
CNP0000432CNS0095592Slightly white alabastrum(diploid) 117.494
CNS0095593Slightly white alabastrum(diploid) 221.420
CNS0095594Slightly white alabastrum(diploid) 317.743
CNS0095595Whole white alabastrum(diploid) 219.797
CNS0095596Whole white alabastrum(diploid) 315.617
CNS0095597Whole white alabastrum(diploid) 419.862
CNS0095598Silvery flower (diploied) 142.502
CNS0095599Silvery flower (diploied) 229.138
CNS0095600Silvery flower (diploied) 328.232
CNS0095601Golden flower (diploid) 130.199
CNS0095602Golden flower (diploid) 237.952
CNS0095603Golden flower (diploid) 337.512
CNS0095604Slightly white alabastrum(tetraploid) 132.475
CNS0095605Slightly white alabastrum(tetraploid) 224.819
CNS0095606Slightly white alabastrum(tetraploid) 377.204
CNS0095607Whole white alabastrum(tetraploid) 128.556
CNS0095608Whole white alabastrum(tetraploid) 214.245
CNS0095609Whole white alabastrum(tetraploid) 329.936
CNS0095610Silvery flower (tetraploid) 129.579
CNS0095611Silvery flower (tetraploid) 230.794
CNS0095612Silvery flower (tetraploid) 319.857
CNS0095613Golden flower (tetraploid) 115.080
CNS0095614Golden flower (tetraploid) 224.217
CNS0095615Golden flower (tetraploid) 339.458
CRA001975CRR073297Stem 165.460
CRR073298Stem 269.118
CRR073299Stem 363.438
CRR073300Leaf 176.434
CRR073301Leaf 270.800
CRR073302Leaf 367.665
CRR073303Juvenile bud 161.380
CRR073304Juvenile bud 238.435
CRR073305Juvenile bud 374.386
CRR073306Third green 128.859
CRR073307Third green 225.252
CRR073308Third green 331.888
CRR073309Second white 122.513
CRR073310Second white 229.006
CRR073311Second white 326.365
CRR073312Silver flowering 123.706
CRR073313Silver flowering 217.829
CRR073314Silver flowering 321.566
CRR073315Gold flowering 127.154
CRR073316Gold flowering 251.945
CRR073317Gold flowering 333.107
CRR073318Tawny withering 137.139
CRR073319Tawny withering 243.561
CRR073320Tawny withering 331.486