Gene detail

Detail information of GWHGAAZE027858

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_010663425.1	1.4408E-102	PREDICTED: uncharacterized protein At4g17910 [Vitis vinifera]
Swissprot	tr\|B3H6K1\|Y4791_ARATH	4E-80	Uncharacterized protein At4g17910 (Precursor)
trEMBL	tr\|A0A0A0L556\|A0A0A0L556_CUCSA	1E-95	Uncharacterized protein {ECO:0000313\|EMBL:KGN55742.1}
TAIR10	AT4G17910.1	3E-58	transferases, transferring acyl groups

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	30365769	30376972	-
GWHAAZE00000008	mRNA	30365769	30376972	-
GWHAAZE00000008	exon	30376883	30376972	-
GWHAAZE00000008	exon	30375324	30375397	-
GWHAAZE00000008	exon	30372807	30372894	-
GWHAAZE00000008	exon	30370229	30370355	-
GWHAAZE00000008	exon	30368378	30368507	-
GWHAAZE00000008	exon	30368238	30368289	-
GWHAAZE00000008	exon	30366748	30366792	-
GWHAAZE00000008	exon	30365769	30365825	-
GWHAAZE00000008	CDS	30376883	30376972	-
GWHAAZE00000008	CDS	30375324	30375397	-
GWHAAZE00000008	CDS	30372807	30372894	-
GWHAAZE00000008	CDS	30370229	30370355	-
GWHAAZE00000008	CDS	30368378	30368507	-
GWHAAZE00000008	CDS	30368238	30368289	-
GWHAAZE00000008	CDS	30366748	30366792	-
GWHAAZE00000008	CDS	30365769	30365825	-

Transcript Sequence
>GWHTAAZE027892 ATGCTTCTTACATGCTTGTGTATTTTGGCTGTTGACTTCAAAGTTTTTCCTAGAAGATTTGCTAAAGCTGAGACTTACGGCACTAGCTTGATGGATCTCGGGGTAGGCTCATTTGTAATGGCTAATGCATTGGTGTCTCGACAAGCACGGGGCATCTCAACAATGAGTTTGAGAAATGCGCTGAAGTCTATTAGTCCACTGCTTTTTCTAGGGTTTGCTCGACTTGTTTGTACAACAGGCGTGGATTATCAGGTCCATGTGGGAGAATATGGAGTGCACTGGAATTTCTTTTTCACACTTGCTGCTGTATCAATCCTAACCTCAATATTTAACTTTCCTCCAAGTTACTGTGGAGTTGTAGGCTCGTTAATACTAGTAGGATACTGGGGTATTTATCTTGTTGCTGTCCAACTGGGAAACTACCTTTTCTTCGGATACTCTTGCAACACTACATTAAGAACGAATAAAGGGGCGAGGATTAGAGTTTGGACTCTCTCTCTTGTGTTCTGGTTATTAACTTTGTTTCTAGACCAGCATGTTGAAAGAGTTTCCCGCAGAATGTGCAACCTGGCTTATGTTACATTGGTGTTGGCTTTAAACCTACAGACTCTAGTTTTGGTGTTTCAGAACTTTGCTGTTGAAGCTTTAGAGGAAAATTTGTAG

Network for GWHGAAZE027858

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF06423.13	GWT1	125	208	5.60E-14

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K05283	PIGW	Metabolic pathways	map01100
K05283	PIGW	Glycosylphosphatidylinositol	map00563

Gene Ontology

GO term	Ontology	Name
GO:0006506	biological_process	GPI anchor biosynthetic process
GO:0016021	cellular_component	integral component of membrane
GO:0016746	molecular_function	transferase activity, transferring acyl groups

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	10.341
	SRR3591706	second leaf	4.914
	SRR3591707	mature leaf	3.690
	SRR3591708	Shoot apex	10.475
	SRR3591709	Stem	10.014
	SRR3591710	White floral bud	7.738
	SRR3591711	White flower	7.679
	SRR3591712	Green floral bud	10.320
	SRR3591713	Yellow flower	7.101
SRP173429	SRR8316895	Juvenile bud stage	5.917
	SRR8316896	Juvenile bud stage	8.995
	SRR8316897	Juvenile bud stage	5.083
	SRR8316894	Third green stage	4.633
	SRR8316900	Third green stage	9.574
	SRR8316901	Third green stage	10.987
	SRR8316898	Complete white stage	3.980
	SRR8316899	Complete white stage	14.628
	SRR8316903	Complete white stage	5.532
	SRR8316902	Silver flowering stage	3.927
	SRR8316904	Silver flowering stage	5.807
	SRR8316905	Silver flowering stage	1.286
	SRR8316906	Gold flowering stage	5.890
	SRR8316907	Gold flowering stage	7.367
	SRR8316908	Gold flowering stage	6.482
SRP132670	SRR6706286	Control	3.175
	SRR6706287	Light intensity 50%	3.113
	SRR6706288	Light intensity 20%	4.027
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	9.019
	CNS0095593	Slightly white alabastrum(diploid) 2	7.092
	CNS0095594	Slightly white alabastrum(diploid) 3	6.762
	CNS0095595	Whole white alabastrum(diploid) 2	6.876
	CNS0095596	Whole white alabastrum(diploid) 3	6.575
	CNS0095597	Whole white alabastrum(diploid) 4	6.008
	CNS0095598	Silvery flower (diploied) 1	7.297
	CNS0095599	Silvery flower (diploied) 2	5.904
	CNS0095600	Silvery flower (diploied) 3	4.570
	CNS0095601	Golden flower (diploid) 1	5.716
	CNS0095602	Golden flower (diploid) 2	4.896
	CNS0095603	Golden flower (diploid) 3	4.636
	CNS0095604	Slightly white alabastrum(tetraploid) 1	7.189
	CNS0095605	Slightly white alabastrum(tetraploid) 2	8.683
	CNS0095606	Slightly white alabastrum(tetraploid) 3	12.520
	CNS0095607	Whole white alabastrum(tetraploid) 1	6.078
	CNS0095608	Whole white alabastrum(tetraploid) 2	10.242
	CNS0095609	Whole white alabastrum(tetraploid) 3	8.828
	CNS0095610	Silvery flower (tetraploid) 1	6.767
	CNS0095611	Silvery flower (tetraploid) 2	6.930
	CNS0095612	Silvery flower (tetraploid) 3	4.494
	CNS0095613	Golden flower (tetraploid) 1	5.751
	CNS0095614	Golden flower (tetraploid) 2	8.494
	CNS0095615	Golden flower (tetraploid) 3	3.554
CRA001975	CRR073297	Stem 1	5.546
	CRR073298	Stem 2	4.309
	CRR073299	Stem 3	2.536
	CRR073300	Leaf 1	5.532
	CRR073301	Leaf 2	6.063
	CRR073302	Leaf 3	1.987
	CRR073303	Juvenile bud 1	4.205
	CRR073304	Juvenile bud 2	1.289
	CRR073305	Juvenile bud 3	2.940
	CRR073306	Third green 1	0.351
	CRR073307	Third green 2	0.865
	CRR073308	Third green 3	1.033
	CRR073309	Second white 1	0.862
	CRR073310	Second white 2	1.032
	CRR073311	Second white 3	0.681
	CRR073312	Silver flowering 1	1.326
	CRR073313	Silver flowering 2	1.098
	CRR073314	Silver flowering 3	1.389
	CRR073315	Gold flowering 1	1.081
	CRR073316	Gold flowering 2	1.764
	CRR073317	Gold flowering 3	1.658
	CRR073318	Tawny withering 1	3.076
	CRR073319	Tawny withering 2	3.861
	CRR073320	Tawny withering 3	4.001