Detail information of GWHGAAZE027875


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010245205.19.15772E-51PREDICTED: uncharacterized protein LOC104588813 [Nelumbo nucifera]
trEMBLtr|A0A061GDU2|A0A061GDU2_THECC1E-42Uncharacterized protein isoform 1 {ECO:0000313|EMBL:EOY25174.1}
TAIR10AT2G35470.18E-17Without detailed annotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene3063512130636314-
GWHAAZE00000008mRNA3063512130636314-
GWHAAZE00000008exon3063602630636314-
GWHAAZE00000008exon3063567630635720-
GWHAAZE00000008exon3063512130635574-
GWHAAZE00000008CDS3063602630636314-
GWHAAZE00000008CDS3063567630635720-
GWHAAZE00000008CDS3063543230635574-
GWHAAZE00000008three_prime_UTR3063512130635431-
Transcript Sequence

Network for GWHGAAZE027875

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0101


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf87.261
SRR3591706second leaf14.308
SRR3591707mature leaf2.331
SRR3591708Shoot apex44.878
SRR3591709Stem32.801
SRR3591710White floral bud8.888
SRR3591711White flower4.622
SRR3591712Green floral bud14.713
SRR3591713Yellow flower2.966
SRP173429 SRR8316895Juvenile bud stage 44.061
SRR8316896Juvenile bud stage 37.771
SRR8316897Juvenile bud stage 28.598
SRR8316894Third green stage 8.448
SRR8316900Third green stage 15.903
SRR8316901Third green stage 31.899
SRR8316898Complete white stage 1.843
SRR8316899Complete white stage 39.375
SRR8316903Complete white stage 3.574
SRR8316902Silver flowering stage4.110
SRR8316904Silver flowering stage1.865
SRR8316905Silver flowering stage1.087
SRR8316906Gold flowering stage 1.671
SRR8316907Gold flowering stage 1.958
SRR8316908Gold flowering stage 1.446
SRP132670SRR6706286Control13.665
SRR6706287Light intensity 50%15.578
SRR6706288Light intensity 20%19.005
CNP0000432CNS0095592Slightly white alabastrum(diploid) 124.769
CNS0095593Slightly white alabastrum(diploid) 240.688
CNS0095594Slightly white alabastrum(diploid) 327.752
CNS0095595Whole white alabastrum(diploid) 223.594
CNS0095596Whole white alabastrum(diploid) 310.643
CNS0095597Whole white alabastrum(diploid) 421.020
CNS0095598Silvery flower (diploied) 113.580
CNS0095599Silvery flower (diploied) 224.447
CNS0095600Silvery flower (diploied) 316.677
CNS0095601Golden flower (diploid) 124.542
CNS0095602Golden flower (diploid) 218.358
CNS0095603Golden flower (diploid) 320.238
CNS0095604Slightly white alabastrum(tetraploid) 19.620
CNS0095605Slightly white alabastrum(tetraploid) 210.687
CNS0095606Slightly white alabastrum(tetraploid) 321.396
CNS0095607Whole white alabastrum(tetraploid) 110.433
CNS0095608Whole white alabastrum(tetraploid) 25.074
CNS0095609Whole white alabastrum(tetraploid) 35.442
CNS0095610Silvery flower (tetraploid) 11.541
CNS0095611Silvery flower (tetraploid) 21.204
CNS0095612Silvery flower (tetraploid) 31.739
CNS0095613Golden flower (tetraploid) 10.906
CNS0095614Golden flower (tetraploid) 20.749
CNS0095615Golden flower (tetraploid) 30.419
CRA001975CRR073297Stem 124.360
CRR073298Stem 222.334
CRR073299Stem 329.969
CRR073300Leaf 117.510
CRR073301Leaf 233.727
CRR073302Leaf 327.709
CRR073303Juvenile bud 122.875
CRR073304Juvenile bud 215.740
CRR073305Juvenile bud 332.958
CRR073306Third green 18.908
CRR073307Third green 216.299
CRR073308Third green 311.337
CRR073309Second white 13.392
CRR073310Second white 22.223
CRR073311Second white 31.767
CRR073312Silver flowering 11.891
CRR073313Silver flowering 21.876
CRR073314Silver flowering 30.740
CRR073315Gold flowering 147.035
CRR073316Gold flowering 255.749
CRR073317Gold flowering 325.362
CRR073318Tawny withering 167.999
CRR073319Tawny withering 268.074
CRR073320Tawny withering 388.384