Gene detail

Detail information of GWHGAAZE027982

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EMS57296.1	5.73713E-47	hypothetical protein TRIUR3_09071 [Triticum urartu]
trEMBL	tr\|A0A067DN25\|A0A067DN25_CITSI	2E-73	Uncharacterized protein {ECO:0000313\|EMBL:KDO40412.1}
TAIR10	AT4G19410.2	5E-30	Pectinacetylesterase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	33247175	33256035	+
GWHAAZE00000008	mRNA	33247175	33256035	+
GWHAAZE00000008	exon	33247175	33247221	+
GWHAAZE00000008	exon	33247739	33247848	+
GWHAAZE00000008	exon	33253116	33253198	+
GWHAAZE00000008	exon	33253544	33253695	+
GWHAAZE00000008	exon	33253811	33253890	+
GWHAAZE00000008	exon	33254004	33254090	+
GWHAAZE00000008	exon	33254182	33254268	+
GWHAAZE00000008	exon	33255400	33255505	+
GWHAAZE00000008	exon	33255646	33255794	+
GWHAAZE00000008	exon	33255895	33256035	+
GWHAAZE00000008	five_prime_UTR	33247175	33247221	+
GWHAAZE00000008	five_prime_UTR	33247739	33247848	+
GWHAAZE00000008	five_prime_UTR	33253116	33253124	+
GWHAAZE00000008	CDS	33253125	33253198	+
GWHAAZE00000008	CDS	33253544	33253695	+
GWHAAZE00000008	CDS	33253811	33253890	+
GWHAAZE00000008	CDS	33254004	33254090	+
GWHAAZE00000008	CDS	33254182	33254268	+
GWHAAZE00000008	CDS	33255400	33255505	+
GWHAAZE00000008	CDS	33255646	33255794	+
GWHAAZE00000008	CDS	33255895	33256035	+

Transcript Sequence
>GWHTAAZE028016 ATAATTAGTAAGCTAAGGCTCTCTTCTTCAACTTCAAAAATTCAAACAATGGAAAATACGAAACTATATGTGCTTGTTTGTTTCATGATGTTGCTGGCAACACAAGGCTCGGCTGTTGACATAACCTATCTTGAGGGTGCAAAGGCGAAAGGAGCAGTTTGTTTGGATGGAAGTGCTCCAGCATACCAGTTTGATAAGGGTGTCGGTGAAGAAGCCAACAGCTGGTTGGTTCACCTGGAGAAAGACGATTCGATTTCAGGGAGGAGGATGGTGTACATCACCCGCATCTTGCCATAACCGGACGCTTTCAGGGAGTGGCTTGGGTTCCTCTATCCGTATGAAGAAAAGACCCTTCACGGGGATTTTGAGCAACAAGAAAGTTAATAATACAAATTTCTATAATTGGAACAGGGTCTTCGTTCGGTACTGCGATGGGGCATCATTTACTGGAGACTTGGAGAAAGTGCATCCTAAGTACAAAGTTTACTTTAGAGGTGCACGCATTTTTGATGCCATCGTCGAGGACCTTTTAGCAAAGGGAATGAAATGTGGATCCAATGCCCTTCTGTCTGGATCTTCAGCTGGTGGGTTGGCTGCAATATTACATTGCGATAAATTCAGAGATCTGCTACCCACCAGCATCAAAATATCTAACATTTTGGCACCAACTGAGAGTGGTCTCAATGGCTCCTGGCACGAATGCCAGTTCCAAATAAGCAAGTGCGCGCCTCATCAAATCAAAATATTGCAACATTTCCGATTACAATTTTTGCATGCAATATCAACCGGACTGCGTAATTCCTCGTCTAGAGGAATGTTTATCAACGCTTGCCTTACTCACTGCCAATCCGAATTTCCAATGAAATGGCTTGGAGACCCTGTTTCCAAGTTACATAACAAGGCGATCGGAGAGGCAGTTGGTGACTGGTTTTATGACCGAAACACAGTTCAATTGATAGATCACACACATGACTTGCCACGACAGTGTGTAATTAATCGAGCTGAGCCAAATGCGAATAATAATTATACTTGGGGTGGTTAG

Network for GWHGAAZE027982

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03283.14	PAE	28	163	2.00E-53

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K19882	NOTUM	Wnt signaling pathway	map04310

Gene Ontology

GO term	Ontology	Name
GO:0016787	molecular_function	hydrolase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.120
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.042
	SRR3591708	Shoot apex	0.236
	SRR3591709	Stem	0.110
	SRR3591710	White floral bud	23.311
	SRR3591711	White flower	8.882
	SRR3591712	Green floral bud	30.103
	SRR3591713	Yellow flower	5.291
SRP173429	SRR8316895	Juvenile bud stage	8.090
	SRR8316896	Juvenile bud stage	6.436
	SRR8316897	Juvenile bud stage	11.084
	SRR8316894	Third green stage	5.635
	SRR8316900	Third green stage	12.222
	SRR8316901	Third green stage	11.687
	SRR8316898	Complete white stage	4.240
	SRR8316899	Complete white stage	35.759
	SRR8316903	Complete white stage	6.580
	SRR8316902	Silver flowering stage	1.065
	SRR8316904	Silver flowering stage	3.753
	SRR8316905	Silver flowering stage	0.360
	SRR8316906	Gold flowering stage	0.509
	SRR8316907	Gold flowering stage	0.074
	SRR8316908	Gold flowering stage	2.612
SRP132670	SRR6706286	Control	16.721
	SRR6706287	Light intensity 50%	17.395
	SRR6706288	Light intensity 20%	15.191
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	7.210
	CNS0095593	Slightly white alabastrum(diploid) 2	11.320
	CNS0095594	Slightly white alabastrum(diploid) 3	5.196
	CNS0095595	Whole white alabastrum(diploid) 2	4.456
	CNS0095596	Whole white alabastrum(diploid) 3	7.995
	CNS0095597	Whole white alabastrum(diploid) 4	5.193
	CNS0095598	Silvery flower (diploied) 1	3.874
	CNS0095599	Silvery flower (diploied) 2	1.956
	CNS0095600	Silvery flower (diploied) 3	1.764
	CNS0095601	Golden flower (diploid) 1	2.442
	CNS0095602	Golden flower (diploid) 2	1.976
	CNS0095603	Golden flower (diploid) 3	2.165
	CNS0095604	Slightly white alabastrum(tetraploid) 1	11.422
	CNS0095605	Slightly white alabastrum(tetraploid) 2	7.405
	CNS0095606	Slightly white alabastrum(tetraploid) 3	23.815
	CNS0095607	Whole white alabastrum(tetraploid) 1	8.193
	CNS0095608	Whole white alabastrum(tetraploid) 2	7.683
	CNS0095609	Whole white alabastrum(tetraploid) 3	23.778
	CNS0095610	Silvery flower (tetraploid) 1	42.040
	CNS0095611	Silvery flower (tetraploid) 2	16.034
	CNS0095612	Silvery flower (tetraploid) 3	12.059
	CNS0095613	Golden flower (tetraploid) 1	1.144
	CNS0095614	Golden flower (tetraploid) 2	84.284
	CNS0095615	Golden flower (tetraploid) 3	12.385
CRA001975	CRR073297	Stem 1	5.137
	CRR073298	Stem 2	3.597
	CRR073299	Stem 3	1.328
	CRR073300	Leaf 1	6.937
	CRR073301	Leaf 2	7.393
	CRR073302	Leaf 3	7.357
	CRR073303	Juvenile bud 1	8.026
	CRR073304	Juvenile bud 2	2.767
	CRR073305	Juvenile bud 3	8.922
	CRR073306	Third green 1	0.342
	CRR073307	Third green 2	1.049
	CRR073308	Third green 3	2.167
	CRR073309	Second white 1	0.044
	CRR073310	Second white 2	0.962
	CRR073311	Second white 3	0.483
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.185
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.615
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.524
	CRR073319	Tawny withering 2	0.127
	CRR073320	Tawny withering 3	0.000