Detail information of GWHGAAZE028007


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007131344.11.53208E-10hypothetical protein PHAVU_011G006000g [Phaseolus vulgaris]
Swissprottr|Q9SUW0|TPPG_ARATH2E-11Probable trehalose-phosphate phosphatase G
trEMBLtr|V7AER8|V7AER8_PHAVU6E-11Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}
TAIR10AT4G22590.16E-10Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene3367698533679310-
GWHAAZE00000008mRNA3367698533679310-
GWHAAZE00000008exon3367698533677123-
GWHAAZE00000008exon3367874633678807-
GWHAAZE00000008exon3367924533679310-
GWHAAZE00000008CDS3367924533679310-
GWHAAZE00000008CDS3367874633678807-
GWHAAZE00000008CDS3367698533677123-
Transcript Sequence

Network for GWHGAAZE028007

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01087otsB Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Starch and sucrose metabolismmap00500

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf2.680
SRR3591707mature leaf2.656
SRR3591708Shoot apex4.093
SRR3591709Stem0.000
SRR3591710White floral bud19.739
SRR3591711White flower1.036
SRR3591712Green floral bud13.924
SRR3591713Yellow flower0.015
SRP173429 SRR8316895Juvenile bud stage 0.056
SRR8316896Juvenile bud stage 0.569
SRR8316897Juvenile bud stage 1.474
SRR8316894Third green stage 1.185
SRR8316900Third green stage 12.307
SRR8316901Third green stage 13.840
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.109
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.130
SRR8316905Silver flowering stage0.193
SRR8316906Gold flowering stage 0.098
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.275
SRR6706287Light intensity 50%0.176
SRR6706288Light intensity 20%0.507
CNP0000432CNS0095592Slightly white alabastrum(diploid) 111.662
CNS0095593Slightly white alabastrum(diploid) 212.812
CNS0095594Slightly white alabastrum(diploid) 311.264
CNS0095595Whole white alabastrum(diploid) 233.165
CNS0095596Whole white alabastrum(diploid) 339.978
CNS0095597Whole white alabastrum(diploid) 437.614
CNS0095598Silvery flower (diploied) 10.222
CNS0095599Silvery flower (diploied) 21.262
CNS0095600Silvery flower (diploied) 30.170
CNS0095601Golden flower (diploid) 10.487
CNS0095602Golden flower (diploid) 20.121
CNS0095603Golden flower (diploid) 30.132
CNS0095604Slightly white alabastrum(tetraploid) 120.952
CNS0095605Slightly white alabastrum(tetraploid) 222.918
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 135.252
CNS0095608Whole white alabastrum(tetraploid) 233.096
CNS0095609Whole white alabastrum(tetraploid) 318.916
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.798
CNS0095612Silvery flower (tetraploid) 30.492
CNS0095613Golden flower (tetraploid) 10.406
CNS0095614Golden flower (tetraploid) 20.221
CNS0095615Golden flower (tetraploid) 30.062
CRA001975CRR073297Stem 10.752
CRR073298Stem 21.153
CRR073299Stem 30.170
CRR073300Leaf 16.857
CRR073301Leaf 22.595
CRR073302Leaf 31.676
CRR073303Juvenile bud 11.110
CRR073304Juvenile bud 22.417
CRR073305Juvenile bud 30.813
CRR073306Third green 11.298
CRR073307Third green 21.040
CRR073308Third green 31.480
CRR073309Second white 10.000
CRR073310Second white 20.103
CRR073311Second white 30.115
CRR073312Silver flowering 10.725
CRR073313Silver flowering 20.264
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.041
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.232
CRR073318Tawny withering 11.142
CRR073319Tawny withering 20.108
CRR073320Tawny withering 30.150