Detail information of GWHGAAZE028146


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP11762.10unnamed protein product [Coffea canephora]
COGYP_001655687.12E-10chaperon-like protein for quinone binding in photosystem II
Swissprottr|P52581|IFRH_LUPAL5E-177Isoflavone reductase homolog
trEMBLtr|A0A068UTZ8|A0A068UTZ8_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_59 {ECO:0000313|EMBL:CDP11762.1}
TAIR10AT1G32100.16E-121pinoresinol reductase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene4237159742376818-
GWHAAZE00000008mRNA4237159742376818-
GWHAAZE00000008exon4237159742371760-
GWHAAZE00000008exon4237228042372483-
GWHAAZE00000008exon4237300742373247-
GWHAAZE00000008exon4237648342376818-
GWHAAZE00000008CDS4237648342376818-
GWHAAZE00000008CDS4237300742373247-
GWHAAZE00000008CDS4237228042372483-
GWHAAZE00000008CDS4237159742371760-
Transcript Sequence

Network for GWHGAAZE028146

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05368.14NmrA82443.90E-60
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K21568PLR Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of various secondary metabolites - part 2map00998

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf18.937
SRR3591706second leaf9.200
SRR3591707mature leaf1.974
SRR3591708Shoot apex11.511
SRR3591709Stem174.881
SRR3591710White floral bud16.038
SRR3591711White flower4.831
SRR3591712Green floral bud6.631
SRR3591713Yellow flower2.579
SRP173429 SRR8316895Juvenile bud stage 42.996
SRR8316896Juvenile bud stage 25.901
SRR8316897Juvenile bud stage 6.890
SRR8316894Third green stage 3.400
SRR8316900Third green stage 7.773
SRR8316901Third green stage 10.463
SRR8316898Complete white stage 1.960
SRR8316899Complete white stage 5.570
SRR8316903Complete white stage 4.762
SRR8316902Silver flowering stage2.211
SRR8316904Silver flowering stage2.348
SRR8316905Silver flowering stage0.714
SRR8316906Gold flowering stage 5.757
SRR8316907Gold flowering stage 8.188
SRR8316908Gold flowering stage 4.865
SRP132670SRR6706286Control3.947
SRR6706287Light intensity 50%4.513
SRR6706288Light intensity 20%4.354
CNP0000432CNS0095592Slightly white alabastrum(diploid) 125.030
CNS0095593Slightly white alabastrum(diploid) 29.710
CNS0095594Slightly white alabastrum(diploid) 321.430
CNS0095595Whole white alabastrum(diploid) 26.614
CNS0095596Whole white alabastrum(diploid) 35.704
CNS0095597Whole white alabastrum(diploid) 45.717
CNS0095598Silvery flower (diploied) 16.502
CNS0095599Silvery flower (diploied) 28.008
CNS0095600Silvery flower (diploied) 35.340
CNS0095601Golden flower (diploid) 12.412
CNS0095602Golden flower (diploid) 25.105
CNS0095603Golden flower (diploid) 34.712
CNS0095604Slightly white alabastrum(tetraploid) 12.279
CNS0095605Slightly white alabastrum(tetraploid) 23.281
CNS0095606Slightly white alabastrum(tetraploid) 39.289
CNS0095607Whole white alabastrum(tetraploid) 10.893
CNS0095608Whole white alabastrum(tetraploid) 21.365
CNS0095609Whole white alabastrum(tetraploid) 34.726
CNS0095610Silvery flower (tetraploid) 11.796
CNS0095611Silvery flower (tetraploid) 21.128
CNS0095612Silvery flower (tetraploid) 31.454
CNS0095613Golden flower (tetraploid) 11.087
CNS0095614Golden flower (tetraploid) 20.908
CNS0095615Golden flower (tetraploid) 30.371
CRA001975CRR073297Stem 136.838
CRR073298Stem 221.244
CRR073299Stem 36.518
CRR073300Leaf 12.451
CRR073301Leaf 22.834
CRR073302Leaf 32.126
CRR073303Juvenile bud 10.890
CRR073304Juvenile bud 20.804
CRR073305Juvenile bud 31.170
CRR073306Third green 11.021
CRR073307Third green 20.749
CRR073308Third green 31.140
CRR073309Second white 11.759
CRR073310Second white 21.438
CRR073311Second white 30.690
CRR073312Silver flowering 10.323
CRR073313Silver flowering 21.618
CRR073314Silver flowering 30.724
CRR073315Gold flowering 11.789
CRR073316Gold flowering 20.341
CRR073317Gold flowering 31.371
CRR073318Tawny withering 115.551
CRR073319Tawny withering 215.216
CRR073320Tawny withering 317.880