Detail information of GWHGAAZE028307


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009804701.13.58521E-07PREDICTED: glycine-rich protein A3-like [Nicotiana sylvestris]
trEMBLtr|M0TCC1|M0TCC1_MUSAM0.0000009Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P33280_001}

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene5032641050329472-
GWHAAZE00000008mRNA5032641050329472-
GWHAAZE00000008exon5032931350329472-
GWHAAZE00000008exon5032641050326474-
GWHAAZE00000008CDS5032931350329472-
GWHAAZE00000008CDS5032641050326474-
Transcript Sequence

Network for GWHGAAZE028307

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0040


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf6.979
SRR3591706second leaf6.848
SRR3591707mature leaf9.152
SRR3591708Shoot apex11.719
SRR3591709Stem11.667
SRR3591710White floral bud0.003
SRR3591711White flower0.016
SRR3591712Green floral bud0.002
SRR3591713Yellow flower0.007
SRP173429 SRR8316895Juvenile bud stage 19.228
SRR8316896Juvenile bud stage 24.019
SRR8316897Juvenile bud stage 3.879
SRR8316894Third green stage 8.559
SRR8316900Third green stage 20.870
SRR8316901Third green stage 25.555
SRR8316898Complete white stage 9.220
SRR8316899Complete white stage 25.958
SRR8316903Complete white stage 24.264
SRR8316902Silver flowering stage11.545
SRR8316904Silver flowering stage22.451
SRR8316905Silver flowering stage10.338
SRR8316906Gold flowering stage 25.030
SRR8316907Gold flowering stage 26.727
SRR8316908Gold flowering stage 16.273
SRP132670SRR6706286Control27.501
SRR6706287Light intensity 50%30.902
SRR6706288Light intensity 20%31.331
CNP0000432CNS0095592Slightly white alabastrum(diploid) 124.424
CNS0095593Slightly white alabastrum(diploid) 219.932
CNS0095594Slightly white alabastrum(diploid) 314.556
CNS0095595Whole white alabastrum(diploid) 215.372
CNS0095596Whole white alabastrum(diploid) 315.312
CNS0095597Whole white alabastrum(diploid) 419.338
CNS0095598Silvery flower (diploied) 126.391
CNS0095599Silvery flower (diploied) 217.585
CNS0095600Silvery flower (diploied) 313.468
CNS0095601Golden flower (diploid) 129.291
CNS0095602Golden flower (diploid) 216.636
CNS0095603Golden flower (diploid) 317.369
CNS0095604Slightly white alabastrum(tetraploid) 17.446
CNS0095605Slightly white alabastrum(tetraploid) 24.687
CNS0095606Slightly white alabastrum(tetraploid) 312.220
CNS0095607Whole white alabastrum(tetraploid) 14.611
CNS0095608Whole white alabastrum(tetraploid) 23.726
CNS0095609Whole white alabastrum(tetraploid) 38.403
CNS0095610Silvery flower (tetraploid) 118.638
CNS0095611Silvery flower (tetraploid) 211.059
CNS0095612Silvery flower (tetraploid) 39.614
CNS0095613Golden flower (tetraploid) 113.035
CNS0095614Golden flower (tetraploid) 212.262
CNS0095615Golden flower (tetraploid) 315.222
CRA001975CRR073297Stem 130.143
CRR073298Stem 221.777
CRR073299Stem 35.925
CRR073300Leaf 126.741
CRR073301Leaf 225.194
CRR073302Leaf 36.997
CRR073303Juvenile bud 14.152
CRR073304Juvenile bud 21.661
CRR073305Juvenile bud 34.794
CRR073306Third green 10.744
CRR073307Third green 22.031
CRR073308Third green 31.613
CRR073309Second white 10.289
CRR073310Second white 24.957
CRR073311Second white 31.136
CRR073312Silver flowering 10.496
CRR073313Silver flowering 21.639
CRR073314Silver flowering 30.208
CRR073315Gold flowering 11.902
CRR073316Gold flowering 27.703
CRR073317Gold flowering 31.540
CRR073318Tawny withering 113.331
CRR073319Tawny withering 210.389
CRR073320Tawny withering 36.385