Detail information of GWHGAAZE028441


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009758764.10PREDICTED: ATP-dependent 6-phosphofructokinase 6-like [Nicotiana sylvestris]
COGYP_003804939.14E-123phosphofructokinase
Swissprottr|Q94AA4|PFKA3_ARATH0ATP-dependent 6-phosphofructokinase 3 {ECO:0000255|HAMAP-Rule:MF_03186}
trEMBLtr|V5RA72|V5RA72_CAMSI0Phosphofructokinase {ECO:0000313|EMBL:AHE93342.1}
TAIR10AT4G26270.10phosphofructokinase 3

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene5668196856691155-
GWHAAZE00000008mRNA5668196856691155-
GWHAAZE00000008exon5668196856682165-
GWHAAZE00000008exon5668420656684360-
GWHAAZE00000008exon5668466656684714-
GWHAAZE00000008exon5668581356686078-
GWHAAZE00000008exon5668714156687270-
GWHAAZE00000008exon5668753856687606-
GWHAAZE00000008exon5668775356687806-
GWHAAZE00000008exon5668794356688101-
GWHAAZE00000008exon5668877556688912-
GWHAAZE00000008exon5668899956689091-
GWHAAZE00000008exon5668947456689513-
GWHAAZE00000008exon5668963556689681-
GWHAAZE00000008exon5669106056691155-
GWHAAZE00000008CDS5669106056691155-
GWHAAZE00000008CDS5668963556689681-
GWHAAZE00000008CDS5668947456689513-
GWHAAZE00000008CDS5668899956689091-
GWHAAZE00000008CDS5668877556688912-
GWHAAZE00000008CDS5668794356688101-
GWHAAZE00000008CDS5668775356687806-
GWHAAZE00000008CDS5668753856687606-
GWHAAZE00000008CDS5668714156687270-
GWHAAZE00000008CDS5668581356686078-
GWHAAZE00000008CDS5668466656684714-
GWHAAZE00000008CDS5668420656684360-
GWHAAZE00000008CDS5668196856682165-
Transcript Sequence

Network for GWHGAAZE028441

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00365.21PFK1034081.70E-64
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00850pfkA, PFK Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Pentose phosphate pathwaymap00030
Fructose and mannose metabolismmap00051
Galactose metabolismmap00052
Methane metabolismmap00680
RNA degradationmap03018
HIF-1 signaling pathwaymap04066
AMPK signaling pathwaymap04152
Glucagon signaling pathwaymap04922
Thyroid hormone signaling pathwaymap04919

Gene Ontology

GO term OntologyName
GO:0006096biological_processglycolytic process
GO:0006002biological_processfructose 6-phosphate metabolic process
GO:0003872molecular_function6-phosphofructokinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf14.389
SRR3591706second leaf1.205
SRR3591707mature leaf4.121
SRR3591708Shoot apex6.218
SRR3591709Stem5.154
SRR3591710White floral bud12.197
SRR3591711White flower7.439
SRR3591712Green floral bud39.043
SRR3591713Yellow flower1.620
SRP173429 SRR8316895Juvenile bud stage 12.154
SRR8316896Juvenile bud stage 17.726
SRR8316897Juvenile bud stage 9.493
SRR8316894Third green stage 9.871
SRR8316900Third green stage 35.114
SRR8316901Third green stage 32.939
SRR8316898Complete white stage 5.095
SRR8316899Complete white stage 18.036
SRR8316903Complete white stage 5.953
SRR8316902Silver flowering stage3.667
SRR8316904Silver flowering stage6.129
SRR8316905Silver flowering stage3.272
SRR8316906Gold flowering stage 6.391
SRR8316907Gold flowering stage 5.759
SRR8316908Gold flowering stage 5.126
SRP132670SRR6706286Control29.528
SRR6706287Light intensity 50%32.064
SRR6706288Light intensity 20%31.571
CNP0000432CNS0095592Slightly white alabastrum(diploid) 119.027
CNS0095593Slightly white alabastrum(diploid) 213.296
CNS0095594Slightly white alabastrum(diploid) 321.094
CNS0095595Whole white alabastrum(diploid) 225.011
CNS0095596Whole white alabastrum(diploid) 328.284
CNS0095597Whole white alabastrum(diploid) 420.636
CNS0095598Silvery flower (diploied) 15.555
CNS0095599Silvery flower (diploied) 25.597
CNS0095600Silvery flower (diploied) 37.817
CNS0095601Golden flower (diploid) 13.141
CNS0095602Golden flower (diploid) 23.608
CNS0095603Golden flower (diploid) 34.628
CNS0095604Slightly white alabastrum(tetraploid) 144.119
CNS0095605Slightly white alabastrum(tetraploid) 235.112
CNS0095606Slightly white alabastrum(tetraploid) 333.377
CNS0095607Whole white alabastrum(tetraploid) 144.332
CNS0095608Whole white alabastrum(tetraploid) 246.557
CNS0095609Whole white alabastrum(tetraploid) 371.015
CNS0095610Silvery flower (tetraploid) 125.019
CNS0095611Silvery flower (tetraploid) 222.640
CNS0095612Silvery flower (tetraploid) 314.642
CNS0095613Golden flower (tetraploid) 16.316
CNS0095614Golden flower (tetraploid) 216.786
CNS0095615Golden flower (tetraploid) 35.096
CRA001975CRR073297Stem 115.999
CRR073298Stem 214.678
CRR073299Stem 311.688
CRR073300Leaf 124.815
CRR073301Leaf 225.450
CRR073302Leaf 319.831
CRR073303Juvenile bud 119.138
CRR073304Juvenile bud 217.979
CRR073305Juvenile bud 38.334
CRR073306Third green 112.101
CRR073307Third green 29.339
CRR073308Third green 310.178
CRR073309Second white 13.566
CRR073310Second white 23.301
CRR073311Second white 32.916
CRR073312Silver flowering 12.122
CRR073313Silver flowering 22.170
CRR073314Silver flowering 32.249
CRR073315Gold flowering 15.658
CRR073316Gold flowering 23.479
CRR073317Gold flowering 33.281
CRR073318Tawny withering 18.470
CRR073319Tawny withering 28.483
CRR073320Tawny withering 37.078