Detail information of GWHGAAZE028446


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrEYU29291.10hypothetical protein MIMGU_mgv1a002717mg [Erythranthe guttata]
COGYP_007218386.18E-163NAD-dependent malic enzyme
Swissprottr|P51615|MAOX_VITVI0NADP-dependent malic enzyme
trEMBLtr|A0A022QMV9|A0A022QMV9_ERYGU0Malic enzyme {ECO:0000256|RuleBase:RU003426}
TAIR10AT5G25880.10NADP-malic enzyme 3

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene5693134056973039-
GWHAAZE00000008mRNA5693134056973039-
GWHAAZE00000008exon5697299556973039-
GWHAAZE00000008exon5697212856972202-
GWHAAZE00000008exon5697134456971495-
GWHAAZE00000008exon5697112656971231-
GWHAAZE00000008exon5697067656970741-
GWHAAZE00000008exon5697047156970566-
GWHAAZE00000008exon5697023556970351-
GWHAAZE00000008exon5696927656969359-
GWHAAZE00000008exon5696905256969150-
GWHAAZE00000008exon5696887156968918-
GWHAAZE00000008exon5696858256968635-
GWHAAZE00000008exon5696829756968395-
GWHAAZE00000008exon5696771256967789-
GWHAAZE00000008exon5696709356967167-
GWHAAZE00000008exon5696650756966597-
GWHAAZE00000008exon5695897656959104-
GWHAAZE00000008exon5695878556958842-
GWHAAZE00000008exon5695372856953880-
GWHAAZE00000008exon5695242556952512-
GWHAAZE00000008exon5694182856941869-
GWHAAZE00000008exon5693966156939783-
GWHAAZE00000008exon5693830156938381-
GWHAAZE00000008exon5693806356938134-
GWHAAZE00000008exon5693724856937360-
GWHAAZE00000008exon5693713356937154-
GWHAAZE00000008exon5693675456936819-
GWHAAZE00000008exon5693453256934588-
GWHAAZE00000008exon5693382056933866-
GWHAAZE00000008exon5693357956933660-
GWHAAZE00000008exon5693233756932426-
GWHAAZE00000008exon5693134056931474-
GWHAAZE00000008CDS5697299556973039-
GWHAAZE00000008CDS5697212856972202-
GWHAAZE00000008CDS5697134456971495-
GWHAAZE00000008CDS5697112656971231-
GWHAAZE00000008CDS5697067656970741-
GWHAAZE00000008CDS5697047156970566-
GWHAAZE00000008CDS5697023556970351-
GWHAAZE00000008CDS5696927656969359-
GWHAAZE00000008CDS5696905256969150-
GWHAAZE00000008CDS5696887156968918-
GWHAAZE00000008CDS5696858256968635-
GWHAAZE00000008CDS5696829756968395-
GWHAAZE00000008CDS5696771256967789-
GWHAAZE00000008CDS5696709356967167-
GWHAAZE00000008CDS5696650756966597-
GWHAAZE00000008CDS5695897656959104-
GWHAAZE00000008CDS5695878556958842-
GWHAAZE00000008CDS5695372856953880-
GWHAAZE00000008CDS5695242556952512-
GWHAAZE00000008CDS5694182856941869-
GWHAAZE00000008CDS5693966156939783-
GWHAAZE00000008CDS5693830156938381-
GWHAAZE00000008CDS5693806356938134-
GWHAAZE00000008CDS5693724856937360-
GWHAAZE00000008CDS5693713356937154-
GWHAAZE00000008CDS5693675456936819-
GWHAAZE00000008CDS5693453256934588-
GWHAAZE00000008CDS5693382056933866-
GWHAAZE00000008CDS5693357956933660-
GWHAAZE00000008CDS5693233756932426-
GWHAAZE00000008CDS5693134056931474-
Transcript Sequence

Network for GWHGAAZE028446

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00390.20malic402366.70E-71
PF03949.16Malic_M3404686.20E-51
PF00579.26tRNA-synt_1b5868321.50E-52
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00029E1.1.1.40, maeB Metabolic pathways map01100
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
Pyruvate metabolismmap00620
Carbon fixation in photosynthetic organismsmap00710
PPAR signaling pathwaymap03320

Gene Ontology

GO term OntologyName
GO:0006418biological_processtRNA aminoacylation for protein translation
GO:0055114biological_processoxidation-reduction process
GO:0006436biological_processtryptophanyl-tRNA aminoacylation
GO:0000166molecular_functionnucleotide binding
GO:0004812molecular_functionaminoacyl-tRNA ligase activity
GO:0005524molecular_functionATP binding
GO:0004471molecular_functionmalate dehydrogenase (decarboxylating) (NAD+) activity
GO:0051287molecular_functionNAD binding
GO:0004830molecular_functiontryptophan-tRNA ligase activity
GO:0004470molecular_functionmalic enzyme activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf27.602
SRR3591706second leaf24.161
SRR3591707mature leaf8.460
SRR3591708Shoot apex30.670
SRR3591709Stem15.410
SRR3591710White floral bud36.819
SRR3591711White flower2.907
SRR3591712Green floral bud149.834
SRR3591713Yellow flower1.614
SRP173429 SRR8316895Juvenile bud stage 13.685
SRR8316896Juvenile bud stage 38.894
SRR8316897Juvenile bud stage 25.649
SRR8316894Third green stage 29.345
SRR8316900Third green stage 157.840
SRR8316901Third green stage 162.681
SRR8316898Complete white stage 4.168
SRR8316899Complete white stage 17.065
SRR8316903Complete white stage 6.096
SRR8316902Silver flowering stage2.511
SRR8316904Silver flowering stage3.260
SRR8316905Silver flowering stage1.344
SRR8316906Gold flowering stage 2.757
SRR8316907Gold flowering stage 2.914
SRR8316908Gold flowering stage 2.434
SRP132670SRR6706286Control80.563
SRR6706287Light intensity 50%80.733
SRR6706288Light intensity 20%76.462
CNP0000432CNS0095592Slightly white alabastrum(diploid) 173.050
CNS0095593Slightly white alabastrum(diploid) 259.769
CNS0095594Slightly white alabastrum(diploid) 357.258
CNS0095595Whole white alabastrum(diploid) 2104.569
CNS0095596Whole white alabastrum(diploid) 3129.154
CNS0095597Whole white alabastrum(diploid) 4114.882
CNS0095598Silvery flower (diploied) 110.780
CNS0095599Silvery flower (diploied) 212.412
CNS0095600Silvery flower (diploied) 35.201
CNS0095601Golden flower (diploid) 16.881
CNS0095602Golden flower (diploid) 24.748
CNS0095603Golden flower (diploid) 35.098
CNS0095604Slightly white alabastrum(tetraploid) 1111.630
CNS0095605Slightly white alabastrum(tetraploid) 296.263
CNS0095606Slightly white alabastrum(tetraploid) 324.919
CNS0095607Whole white alabastrum(tetraploid) 1176.637
CNS0095608Whole white alabastrum(tetraploid) 2227.488
CNS0095609Whole white alabastrum(tetraploid) 3177.933
CNS0095610Silvery flower (tetraploid) 12.331
CNS0095611Silvery flower (tetraploid) 24.266
CNS0095612Silvery flower (tetraploid) 34.391
CNS0095613Golden flower (tetraploid) 11.171
CNS0095614Golden flower (tetraploid) 21.757
CNS0095615Golden flower (tetraploid) 32.213
CRA001975CRR073297Stem 140.363
CRR073298Stem 244.165
CRR073299Stem 323.612
CRR073300Leaf 199.188
CRR073301Leaf 293.438
CRR073302Leaf 357.183
CRR073303Juvenile bud 181.369
CRR073304Juvenile bud 260.834
CRR073305Juvenile bud 316.691
CRR073306Third green 112.977
CRR073307Third green 216.924
CRR073308Third green 313.169
CRR073309Second white 11.559
CRR073310Second white 22.486
CRR073311Second white 32.893
CRR073312Silver flowering 110.468
CRR073313Silver flowering 211.429
CRR073314Silver flowering 37.069
CRR073315Gold flowering 133.262
CRR073316Gold flowering 234.817
CRR073317Gold flowering 328.412
CRR073318Tawny withering 125.297
CRR073319Tawny withering 231.016
CRR073320Tawny withering 326.345