Detail information of GWHGAAZE028447


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP34168.10hypothetical protein JCGZ_07739 [Jatropha curcas]
COGYP_006810392.13E-12putative serine/threonine protein kinase
Swissprottr|P42158|KC1D_ARATH8E-56Casein kinase I isoform delta-like
trEMBLtr|A0A067KGP9|A0A067KGP9_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP34168.1}
TAIR10AT2G25760.10Protein kinase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene5704319857050242-
GWHAAZE00000008mRNA5704319857050242-
GWHAAZE00000008exon5704319857043392-
GWHAAZE00000008exon5704374157043898-
GWHAAZE00000008exon5704399757044087-
GWHAAZE00000008exon5704450057044674-
GWHAAZE00000008exon5704531557045445-
GWHAAZE00000008exon5704582957046047-
GWHAAZE00000008exon5704684657046975-
GWHAAZE00000008exon5704709457047160-
GWHAAZE00000008exon5704726257047356-
GWHAAZE00000008exon5704780257047873-
GWHAAZE00000008exon5704797757048032-
GWHAAZE00000008exon5704811657048185-
GWHAAZE00000008exon5704861757048690-
GWHAAZE00000008exon5704878357048914-
GWHAAZE00000008exon5704988657050242-
GWHAAZE00000008CDS5704988657050242-
GWHAAZE00000008CDS5704878357048914-
GWHAAZE00000008CDS5704861757048690-
GWHAAZE00000008CDS5704811657048185-
GWHAAZE00000008CDS5704797757048032-
GWHAAZE00000008CDS5704780257047873-
GWHAAZE00000008CDS5704726257047356-
GWHAAZE00000008CDS5704709457047160-
GWHAAZE00000008CDS5704684657046975-
GWHAAZE00000008CDS5704582957046047-
GWHAAZE00000008CDS5704531557045445-
GWHAAZE00000008CDS5704450057044674-
GWHAAZE00000008CDS5704399757044087-
GWHAAZE00000008CDS5704374157043898-
GWHAAZE00000008CDS5704319857043392-
Transcript Sequence

Network for GWHGAAZE028447

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase1283622.80E-15
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCK1_CK1-Pl

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf63.826
SRR3591706second leaf39.645
SRR3591707mature leaf50.917
SRR3591708Shoot apex80.092
SRR3591709Stem69.997
SRR3591710White floral bud76.797
SRR3591711White flower86.957
SRR3591712Green floral bud63.302
SRR3591713Yellow flower76.463
SRP173429 SRR8316895Juvenile bud stage 38.536
SRR8316896Juvenile bud stage 52.427
SRR8316897Juvenile bud stage 23.416
SRR8316894Third green stage 24.384
SRR8316900Third green stage 60.502
SRR8316901Third green stage 56.062
SRR8316898Complete white stage 24.765
SRR8316899Complete white stage 85.393
SRR8316903Complete white stage 46.330
SRR8316902Silver flowering stage27.522
SRR8316904Silver flowering stage39.348
SRR8316905Silver flowering stage19.747
SRR8316906Gold flowering stage 67.358
SRR8316907Gold flowering stage 66.067
SRR8316908Gold flowering stage 70.923
SRP132670SRR6706286Control68.084
SRR6706287Light intensity 50%71.909
SRR6706288Light intensity 20%71.453
CNP0000432CNS0095592Slightly white alabastrum(diploid) 136.739
CNS0095593Slightly white alabastrum(diploid) 229.641
CNS0095594Slightly white alabastrum(diploid) 330.384
CNS0095595Whole white alabastrum(diploid) 226.038
CNS0095596Whole white alabastrum(diploid) 322.399
CNS0095597Whole white alabastrum(diploid) 427.089
CNS0095598Silvery flower (diploied) 161.480
CNS0095599Silvery flower (diploied) 250.001
CNS0095600Silvery flower (diploied) 368.783
CNS0095601Golden flower (diploid) 150.201
CNS0095602Golden flower (diploid) 270.699
CNS0095603Golden flower (diploid) 372.175
CNS0095604Slightly white alabastrum(tetraploid) 137.408
CNS0095605Slightly white alabastrum(tetraploid) 233.635
CNS0095606Slightly white alabastrum(tetraploid) 379.751
CNS0095607Whole white alabastrum(tetraploid) 125.727
CNS0095608Whole white alabastrum(tetraploid) 218.434
CNS0095609Whole white alabastrum(tetraploid) 346.965
CNS0095610Silvery flower (tetraploid) 171.335
CNS0095611Silvery flower (tetraploid) 268.543
CNS0095612Silvery flower (tetraploid) 353.952
CNS0095613Golden flower (tetraploid) 139.718
CNS0095614Golden flower (tetraploid) 260.710
CNS0095615Golden flower (tetraploid) 360.033
CRA001975CRR073297Stem 174.191
CRR073298Stem 267.044
CRR073299Stem 368.877
CRR073300Leaf 167.727
CRR073301Leaf 259.724
CRR073302Leaf 349.224
CRR073303Juvenile bud 157.830
CRR073304Juvenile bud 239.666
CRR073305Juvenile bud 375.984
CRR073306Third green 134.342
CRR073307Third green 227.164
CRR073308Third green 334.779
CRR073309Second white 137.341
CRR073310Second white 245.732
CRR073311Second white 348.718
CRR073312Silver flowering 140.341
CRR073313Silver flowering 242.071
CRR073314Silver flowering 342.541
CRR073315Gold flowering 127.607
CRR073316Gold flowering 240.716
CRR073317Gold flowering 330.002
CRR073318Tawny withering 153.476
CRR073319Tawny withering 247.233
CRR073320Tawny withering 353.575