Detail information of GWHGAAZE028451


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009631868.13.7623E-173PREDICTED: uncharacterized protein LOC104121552 [Nicotiana tomentosiformis]
trEMBLtr|A0A061G4Y5|A0A061G4Y5_THECC2E-171Zinc finger family protein {ECO:0000313|EMBL:EOY24473.1}
TAIR10AT4G12240.15E-115zinc finger (C2H2 type) family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene5719895457200027+
GWHAAZE00000008mRNA5719895457200027+
GWHAAZE00000008exon5719895457200027+
GWHAAZE00000008CDS5719895457200027+
Transcript Sequence

Network for GWHGAAZE028451

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0267


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01936.19NYN1862661.60E-07
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676molecular_functionnucleic acid binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf16.073
SRR3591706second leaf9.563
SRR3591707mature leaf12.572
SRR3591708Shoot apex17.705
SRR3591709Stem19.460
SRR3591710White floral bud14.309
SRR3591711White flower17.818
SRR3591712Green floral bud17.021
SRR3591713Yellow flower12.770
SRP173429 SRR8316895Juvenile bud stage 12.028
SRR8316896Juvenile bud stage 21.195
SRR8316897Juvenile bud stage 10.149
SRR8316894Third green stage 8.052
SRR8316900Third green stage 19.718
SRR8316901Third green stage 19.814
SRR8316898Complete white stage 5.835
SRR8316899Complete white stage 23.803
SRR8316903Complete white stage 15.354
SRR8316902Silver flowering stage11.915
SRR8316904Silver flowering stage14.391
SRR8316905Silver flowering stage7.571
SRR8316906Gold flowering stage 21.382
SRR8316907Gold flowering stage 22.555
SRR8316908Gold flowering stage 16.476
SRP132670SRR6706286Control14.701
SRR6706287Light intensity 50%15.732
SRR6706288Light intensity 20%16.336
CNP0000432CNS0095592Slightly white alabastrum(diploid) 120.092
CNS0095593Slightly white alabastrum(diploid) 220.294
CNS0095594Slightly white alabastrum(diploid) 319.028
CNS0095595Whole white alabastrum(diploid) 212.999
CNS0095596Whole white alabastrum(diploid) 311.572
CNS0095597Whole white alabastrum(diploid) 415.276
CNS0095598Silvery flower (diploied) 116.901
CNS0095599Silvery flower (diploied) 214.706
CNS0095600Silvery flower (diploied) 314.264
CNS0095601Golden flower (diploid) 117.202
CNS0095602Golden flower (diploid) 213.129
CNS0095603Golden flower (diploid) 311.524
CNS0095604Slightly white alabastrum(tetraploid) 128.470
CNS0095605Slightly white alabastrum(tetraploid) 224.088
CNS0095606Slightly white alabastrum(tetraploid) 331.408
CNS0095607Whole white alabastrum(tetraploid) 119.854
CNS0095608Whole white alabastrum(tetraploid) 216.861
CNS0095609Whole white alabastrum(tetraploid) 323.038
CNS0095610Silvery flower (tetraploid) 120.334
CNS0095611Silvery flower (tetraploid) 216.079
CNS0095612Silvery flower (tetraploid) 315.107
CNS0095613Golden flower (tetraploid) 114.912
CNS0095614Golden flower (tetraploid) 216.004
CNS0095615Golden flower (tetraploid) 313.326
CRA001975CRR073297Stem 114.364
CRR073298Stem 213.097
CRR073299Stem 35.310
CRR073300Leaf 116.018
CRR073301Leaf 215.137
CRR073302Leaf 36.655
CRR073303Juvenile bud 18.567
CRR073304Juvenile bud 24.105
CRR073305Juvenile bud 37.981
CRR073306Third green 13.548
CRR073307Third green 23.950
CRR073308Third green 34.026
CRR073309Second white 12.725
CRR073310Second white 25.053
CRR073311Second white 35.432
CRR073312Silver flowering 14.336
CRR073313Silver flowering 24.129
CRR073314Silver flowering 34.244
CRR073315Gold flowering 17.380
CRR073316Gold flowering 27.057
CRR073317Gold flowering 33.740
CRR073318Tawny withering 19.440
CRR073319Tawny withering 212.652
CRR073320Tawny withering 39.261