Detail information of GWHGAAZE028521


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010648509.11.62789E-54PREDICTED: protein EMBRYONIC FLOWER 1 [Vitis vinifera]
Swissprottr|Q9LYD9|EMF1_ARATH1E-20Protein EMBRYONIC FLOWER 1
trEMBLtr|A5AI51|A5AI51_VITVI5E-52Putative uncharacterized protein {ECO:0000313|EMBL:CAN71330.1}
TAIR10AT5G11530.17E-20embryonic flower 1 (EMF1)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene5897549658977052-
GWHAAZE00000008mRNA5897549658977052-
GWHAAZE00000008exon5897549658977052-
GWHAAZE00000008CDS5897549658977052-
Transcript Sequence

Network for GWHGAAZE028521

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0146


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.358
SRR3591706second leaf7.569
SRR3591707mature leaf10.649
SRR3591708Shoot apex6.160
SRR3591709Stem8.995
SRR3591710White floral bud10.062
SRR3591711White flower16.417
SRR3591712Green floral bud6.366
SRR3591713Yellow flower12.380
SRP173429 SRR8316895Juvenile bud stage 9.242
SRR8316896Juvenile bud stage 10.513
SRR8316897Juvenile bud stage 3.909
SRR8316894Third green stage 5.169
SRR8316900Third green stage 9.154
SRR8316901Third green stage 8.331
SRR8316898Complete white stage 4.624
SRR8316899Complete white stage 14.535
SRR8316903Complete white stage 9.330
SRR8316902Silver flowering stage8.237
SRR8316904Silver flowering stage15.832
SRR8316905Silver flowering stage5.888
SRR8316906Gold flowering stage 13.967
SRR8316907Gold flowering stage 15.209
SRR8316908Gold flowering stage 10.747
SRP132670SRR6706286Control4.293
SRR6706287Light intensity 50%5.749
SRR6706288Light intensity 20%4.692
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.997
CNS0095593Slightly white alabastrum(diploid) 24.973
CNS0095594Slightly white alabastrum(diploid) 34.049
CNS0095595Whole white alabastrum(diploid) 25.483
CNS0095596Whole white alabastrum(diploid) 33.544
CNS0095597Whole white alabastrum(diploid) 45.020
CNS0095598Silvery flower (diploied) 115.213
CNS0095599Silvery flower (diploied) 29.721
CNS0095600Silvery flower (diploied) 311.738
CNS0095601Golden flower (diploid) 18.311
CNS0095602Golden flower (diploid) 212.030
CNS0095603Golden flower (diploid) 312.156
CNS0095604Slightly white alabastrum(tetraploid) 14.207
CNS0095605Slightly white alabastrum(tetraploid) 21.946
CNS0095606Slightly white alabastrum(tetraploid) 38.382
CNS0095607Whole white alabastrum(tetraploid) 12.354
CNS0095608Whole white alabastrum(tetraploid) 21.365
CNS0095609Whole white alabastrum(tetraploid) 34.437
CNS0095610Silvery flower (tetraploid) 17.204
CNS0095611Silvery flower (tetraploid) 26.988
CNS0095612Silvery flower (tetraploid) 39.033
CNS0095613Golden flower (tetraploid) 13.596
CNS0095614Golden flower (tetraploid) 24.262
CNS0095615Golden flower (tetraploid) 36.826
CRA001975CRR073297Stem 18.002
CRR073298Stem 26.645
CRR073299Stem 31.959
CRR073300Leaf 17.306
CRR073301Leaf 26.365
CRR073302Leaf 32.838
CRR073303Juvenile bud 12.527
CRR073304Juvenile bud 21.882
CRR073305Juvenile bud 34.197
CRR073306Third green 13.540
CRR073307Third green 21.597
CRR073308Third green 33.346
CRR073309Second white 12.281
CRR073310Second white 23.938
CRR073311Second white 32.821
CRR073312Silver flowering 12.196
CRR073313Silver flowering 21.129
CRR073314Silver flowering 31.954
CRR073315Gold flowering 11.642
CRR073316Gold flowering 23.342
CRR073317Gold flowering 31.347
CRR073318Tawny withering 11.583
CRR073319Tawny withering 22.471
CRR073320Tawny withering 32.689