Gene detail

Detail information of GWHGAAZE028617

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007013782.1	0	Flavin monooxygenase-like protein floozy [Theobroma cacao]
COG	NP_108142.1	4E-75	dimethylaniline monooxygenase
Swissprot	tr\|Q9LFM5\|YUC4_ARATH	0	Probable indole-3-pyruvate monooxygenase YUCCA4
trEMBL	tr\|A0A061GPE2\|A0A061GPE2_THECC	0	Flavin-containing monooxygenase {ECO:0000256\|RuleBase:RU361177}
TAIR10	AT5G11320.1	4E-177	Flavin-binding monooxygenase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	61282877	61287624	-
GWHAAZE00000008	mRNA	61282877	61287624	-
GWHAAZE00000008	exon	61282877	61283113	-
GWHAAZE00000008	exon	61284925	61285047	-
GWHAAZE00000008	exon	61285468	61285716	-
GWHAAZE00000008	exon	61286989	61287624	-
GWHAAZE00000008	CDS	61286989	61287624	-
GWHAAZE00000008	CDS	61285468	61285716	-
GWHAAZE00000008	CDS	61284925	61285047	-
GWHAAZE00000008	CDS	61282877	61283113	-

Transcript Sequence
>GWHTAAZE028651 ATGGGTTCTTGCAAAGAAAAAGACCCAAATCAAACAAATTCCTTGTGGGTTCATGGACCTATCATTGTAGGTGCTGGACCATCTGGTATTTCTGTCTCAGCATGCCTTAAAGAAAATGGAATCCCTTCTTTAATTCTTGAAAGAAGTGATTGCATAGCTTCTTTATGGCAACAAAGAACCTATGATCGCCTCAAACTCCACCTCCCCAAGCATTTCTGTGAGCTCCCCTTGTTTGGTTACCCAGAAAATTTCCCCAAATACCCAACAAAGCACCAATTCATATCTTACATGGAATCCTATGCCACCCACTTCTCCATTTCCCCTAAATTCAATCAAATTGTGGAAAGTGCTGAGTTTGATCATGCGTGTGGGTTTTGGAGGGTTAAGACCCAAGATTGTGAGTACATTTCACGGTGGCTGGTAGTGGCTACCGGCGAGAATGCCGAGGCAGTGGTGCCGGAGATACAGGGGATTGAAGGGTTTAGTGGGAAATTGGTGCATACAAGTGGGTATAGATGTGGTGGTGAGTTTAGGAATCAGAGGGTTTTGGTTGTTGGGTGTGGGAATTCTGGTATGGAAGTTAGTTTAGACCTTTGTAGATACAATGCCATCCCTCATTTAGTTGTTAGAAACTCTGTTCATGTTTTACCAAGGGAGATGTTTAGCTTATCCACATTTGGGATAGCGATGGCTCTTCTCAAATGGCTACCTTTGAGAATGGTGGACAAGTTGCTCTTACTAATGGCCAATTTCACTCTTGGAAATACTGATAAATTAGGTCTCAGGCGACCCAAAACAGGCCCTATCGAGCTTAAGAACGCCACCGGAAAGACGCCCGTGCTTGATTCTGGTGCATTATCCCTGATAAAATCAGGCAAGATTAAGGTGATGGAAGGTGTGAAAGAGATAACAAGGAATGGGGCAAAGTTCATGGATGGACAAGAGAAAGAATTTGATTCTATAGTATTGGCAACTGGCTACAAGAGCAATGTACCATCTTGGCTCAAGGGCAGTGATTTTTTTACAGAGGATGGAATGCCCAAAACACCCTTCCCTAATGGATGGAAAGGAGAGAAAGGATTGTATACAGTAGGGTTCACCAGAAGAGGTCTTCTTGGGACAGCATCAGATGCCGTTAAAATTGCTCGAGATATTGCAGATCAATGGAGGACAATCCAGGACAACAAAAATATTTGTCCCCCATATTATCGTCCAAATATAATTAACCATGCCCCAAAATATTGA

Network for GWHGAAZE028617

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00743.20	FMO-like	22	332	7.50E-26

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K11816	YUCCA	Metabolic pathways	map01100
K11816	YUCCA	Tryptophan metabolism	map00380

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0004499	molecular_function	N,N-dimethylaniline monooxygenase activity
GO:0050660	molecular_function	flavin adenine dinucleotide binding
GO:0050661	molecular_function	NADP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	1.474
	SRR3591706	second leaf	0.068
	SRR3591707	mature leaf	0.177
	SRR3591708	Shoot apex	4.886
	SRR3591709	Stem	1.335
	SRR3591710	White floral bud	0.000
	SRR3591711	White flower	0.078
	SRR3591712	Green floral bud	0.650
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	0.404
	SRR8316896	Juvenile bud stage	0.295
	SRR8316897	Juvenile bud stage	0.232
	SRR8316894	Third green stage	0.190
	SRR8316900	Third green stage	0.124
	SRR8316901	Third green stage	0.216
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.164
	SRR8316903	Complete white stage	0.000
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.081
SRP132670	SRR6706286	Control	0.195
	SRR6706287	Light intensity 50%	0.334
	SRR6706288	Light intensity 20%	0.240
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.188
	CNS0095593	Slightly white alabastrum(diploid) 2	0.283
	CNS0095594	Slightly white alabastrum(diploid) 3	0.000
	CNS0095595	Whole white alabastrum(diploid) 2	0.307
	CNS0095596	Whole white alabastrum(diploid) 3	0.416
	CNS0095597	Whole white alabastrum(diploid) 4	0.251
	CNS0095598	Silvery flower (diploied) 1	0.312
	CNS0095599	Silvery flower (diploied) 2	0.000
	CNS0095600	Silvery flower (diploied) 3	0.000
	CNS0095601	Golden flower (diploid) 1	0.000
	CNS0095602	Golden flower (diploid) 2	0.000
	CNS0095603	Golden flower (diploid) 3	0.000
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.115
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.172
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.472
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.413
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.167
	CNS0095610	Silvery flower (tetraploid) 1	0.157
	CNS0095611	Silvery flower (tetraploid) 2	0.000
	CNS0095612	Silvery flower (tetraploid) 3	0.055
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	1.242
	CRR073298	Stem 2	0.183
	CRR073299	Stem 3	0.256
	CRR073300	Leaf 1	0.377
	CRR073301	Leaf 2	0.073
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.087
	CRR073310	Second white 2	0.095
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.190
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.731
	CRR073319	Tawny withering 2	0.671
	CRR073320	Tawny withering 3	0.468