Gene detail

Detail information of GWHGAAZE028621

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011086444.1	2.74577E-92	PREDICTED: N-alpha-acetyltransferase 50 [Sesamum indicum]
COG	NP_110533.1	2E-13	N-terminal acetyltransferase complex, Ard1 subunit
Swissprot	tr\|O80438\|MAK3_ARATH	7E-10	N-alpha-acetyltransferase MAK3
trEMBL	tr\|A0A059CQM6\|A0A059CQM6_EUCGR	2E-92	Uncharacterized protein {ECO:0000313\|EMBL:KCW80461.1}
TAIR10	AT5G11340.1	6E-66	Acyl-CoA N-acyltransferases (NAT) superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	61603904	61610611	+
GWHAAZE00000008	mRNA	61603904	61610611	+
GWHAAZE00000008	exon	61603904	61604118	+
GWHAAZE00000008	exon	61608891	61609013	+
GWHAAZE00000008	exon	61610102	61610611	+
GWHAAZE00000008	five_prime_UTR	61603904	61603961	+
GWHAAZE00000008	CDS	61603962	61604118	+
GWHAAZE00000008	CDS	61608891	61609013	+
GWHAAZE00000008	CDS	61610102	61610319	+
GWHAAZE00000008	three_prime_UTR	61610320	61610611	+

Transcript Sequence
>GWHTAAZE028655 TATTAATAAATTTTAGAGAGAGAGGGAGAGAAGAATCAAAATCAGAATCAAAGTGAAAATGGGGGAAGGTGGAGGCGAAGGGGGAATATCAATGGTTGGAGTCAGCGAAAAGAACATTATGCAATTGAAGAAGCTTAATTCTATCCTCTTCCCCGTTCGTTACAACCACAAATACTATTCCGATTCCCTCGCCTCCGGCGATTTCACTAAACTAGCATATTACAGTGAGACATGTGTTGGTGCTATTGCATGCCAGCTTGAGAAGAAGGAAGGCGGGGATCTCCGTGTATACATCATGACTTTGGGTGTTCTAGCTCCCTATCGTGGCCTAGGTATTGGTACGCAGCTGTTAAATCACGTCCTCGATCTCTGCTCGAAGCAGGACATTGGCGAAATTTACTTGCATGTGCAAACAGACAACGAAGAAGCCATCAACTTCTACAAGAAGTTCGGATTTGAAATCACCGAAACCATCCACAACTATTACACCCACATTACTCCAGCCGATTGCTACGTTGTTACGAAATTCGTACCTCAATCTCAACCGCAGAAATAACATTTGCATAGAGCTGGTTTCTACTGGGTTTATATATAAATATTTTCGTAAGTTGTTTCAAGGGTTAAAAGGATTGTAGTGTTTAGAAGTGTTGTTGTTGGCCATTTGTTTGTTATGCAGCTTATGCTGTTGTGGTTCAAGAGAAGTCCAAATTTTGAACCATTTAAAAGAAATCAAAAAAATCAAGGATAGTTTTATTTTTGACAAACATAAGGGTTTTTTTAAGTATAGTTTAAATATTCCCTTTGCGAGTTTTGCAATATTTTTGACATTGAATTTAATCAAGTTTTTA

Network for GWHGAAZE028621

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00583.26	Acetyltransf_1	49	133	2.10E-16

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	GNAT

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0008080	molecular_function	N-acetyltransferase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	7.641
	SRR3591706	second leaf	6.700
	SRR3591707	mature leaf	4.507
	SRR3591708	Shoot apex	8.905
	SRR3591709	Stem	8.180
	SRR3591710	White floral bud	6.268
	SRR3591711	White flower	6.792
	SRR3591712	Green floral bud	8.189
	SRR3591713	Yellow flower	4.893
SRP173429	SRR8316895	Juvenile bud stage	6.119
	SRR8316896	Juvenile bud stage	6.570
	SRR8316897	Juvenile bud stage	2.851
	SRR8316894	Third green stage	2.800
	SRR8316900	Third green stage	9.171
	SRR8316901	Third green stage	12.273
	SRR8316898	Complete white stage	2.566
	SRR8316899	Complete white stage	11.188
	SRR8316903	Complete white stage	2.186
	SRR8316902	Silver flowering stage	1.970
	SRR8316904	Silver flowering stage	2.913
	SRR8316905	Silver flowering stage	0.711
	SRR8316906	Gold flowering stage	5.025
	SRR8316907	Gold flowering stage	5.675
	SRR8316908	Gold flowering stage	4.780
SRP132670	SRR6706286	Control	8.052
	SRR6706287	Light intensity 50%	7.464
	SRR6706288	Light intensity 20%	9.104
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	14.239
	CNS0095593	Slightly white alabastrum(diploid) 2	16.329
	CNS0095594	Slightly white alabastrum(diploid) 3	14.913
	CNS0095595	Whole white alabastrum(diploid) 2	11.093
	CNS0095596	Whole white alabastrum(diploid) 3	11.493
	CNS0095597	Whole white alabastrum(diploid) 4	8.180
	CNS0095598	Silvery flower (diploied) 1	5.401
	CNS0095599	Silvery flower (diploied) 2	3.682
	CNS0095600	Silvery flower (diploied) 3	5.011
	CNS0095601	Golden flower (diploid) 1	5.992
	CNS0095602	Golden flower (diploid) 2	3.383
	CNS0095603	Golden flower (diploid) 3	3.583
	CNS0095604	Slightly white alabastrum(tetraploid) 1	9.412
	CNS0095605	Slightly white alabastrum(tetraploid) 2	8.981
	CNS0095606	Slightly white alabastrum(tetraploid) 3	8.718
	CNS0095607	Whole white alabastrum(tetraploid) 1	8.295
	CNS0095608	Whole white alabastrum(tetraploid) 2	6.925
	CNS0095609	Whole white alabastrum(tetraploid) 3	7.913
	CNS0095610	Silvery flower (tetraploid) 1	4.576
	CNS0095611	Silvery flower (tetraploid) 2	5.256
	CNS0095612	Silvery flower (tetraploid) 3	3.364
	CNS0095613	Golden flower (tetraploid) 1	3.039
	CNS0095614	Golden flower (tetraploid) 2	5.070
	CNS0095615	Golden flower (tetraploid) 3	1.694
CRA001975	CRR073297	Stem 1	10.081
	CRR073298	Stem 2	8.424
	CRR073299	Stem 3	7.270
	CRR073300	Leaf 1	12.030
	CRR073301	Leaf 2	10.620
	CRR073302	Leaf 3	12.395
	CRR073303	Juvenile bud 1	11.296
	CRR073304	Juvenile bud 2	11.834
	CRR073305	Juvenile bud 3	4.896
	CRR073306	Third green 1	1.960
	CRR073307	Third green 2	3.607
	CRR073308	Third green 3	1.355
	CRR073309	Second white 1	1.864
	CRR073310	Second white 2	2.472
	CRR073311	Second white 3	1.180
	CRR073312	Silver flowering 1	0.369
	CRR073313	Silver flowering 2	1.965
	CRR073314	Silver flowering 3	2.091
	CRR073315	Gold flowering 1	9.086
	CRR073316	Gold flowering 2	8.975
	CRR073317	Gold flowering 3	5.681
	CRR073318	Tawny withering 1	10.819
	CRR073319	Tawny withering 2	6.271
	CRR073320	Tawny withering 3	9.244