Detail information of GWHGAAZE028679


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008245592.13.0298E-113PREDICTED: UPF0481 protein At3g47200-like [Prunus mume]
Swissprottr|Q9SD53|Y3720_ARATH1E-46UPF0481 protein At3g47200
trEMBLtr|W9SPC1|W9SPC1_9ROSA3E-112Uncharacterized protein {ECO:0000313|EMBL:EXC44966.1}
TAIR10AT4G31980.13E-81Without detailed annotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene6502982265031102+
GWHAAZE00000008mRNA6502982265031102+
GWHAAZE00000008exon6502982265031102+
GWHAAZE00000008CDS6502982265031102+
Transcript Sequence

Network for GWHGAAZE028679

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0079


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03140.16DUF247334143.80E-114
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.250
SRR3591706second leaf0.288
SRR3591707mature leaf0.448
SRR3591708Shoot apex0.805
SRR3591709Stem3.777
SRR3591710White floral bud0.538
SRR3591711White flower2.193
SRR3591712Green floral bud1.026
SRR3591713Yellow flower2.523
SRP173429 SRR8316895Juvenile bud stage 0.750
SRR8316896Juvenile bud stage 1.366
SRR8316897Juvenile bud stage 0.107
SRR8316894Third green stage 0.410
SRR8316900Third green stage 0.423
SRR8316901Third green stage 0.517
SRR8316898Complete white stage 0.225
SRR8316899Complete white stage 1.584
SRR8316903Complete white stage 0.614
SRR8316902Silver flowering stage0.453
SRR8316904Silver flowering stage0.964
SRR8316905Silver flowering stage0.493
SRR8316906Gold flowering stage 1.574
SRR8316907Gold flowering stage 0.765
SRR8316908Gold flowering stage 2.916
SRP132670SRR6706286Control0.466
SRR6706287Light intensity 50%0.302
SRR6706288Light intensity 20%0.239
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.026
CNS0095593Slightly white alabastrum(diploid) 21.742
CNS0095594Slightly white alabastrum(diploid) 33.298
CNS0095595Whole white alabastrum(diploid) 20.853
CNS0095596Whole white alabastrum(diploid) 30.721
CNS0095597Whole white alabastrum(diploid) 41.480
CNS0095598Silvery flower (diploied) 12.618
CNS0095599Silvery flower (diploied) 21.968
CNS0095600Silvery flower (diploied) 31.302
CNS0095601Golden flower (diploid) 14.729
CNS0095602Golden flower (diploid) 22.352
CNS0095603Golden flower (diploid) 31.639
CNS0095604Slightly white alabastrum(tetraploid) 10.411
CNS0095605Slightly white alabastrum(tetraploid) 20.183
CNS0095606Slightly white alabastrum(tetraploid) 30.442
CNS0095607Whole white alabastrum(tetraploid) 10.248
CNS0095608Whole white alabastrum(tetraploid) 20.436
CNS0095609Whole white alabastrum(tetraploid) 30.183
CNS0095610Silvery flower (tetraploid) 10.089
CNS0095611Silvery flower (tetraploid) 20.152
CNS0095612Silvery flower (tetraploid) 30.364
CNS0095613Golden flower (tetraploid) 10.186
CNS0095614Golden flower (tetraploid) 20.362
CNS0095615Golden flower (tetraploid) 30.050
CRA001975CRR073297Stem 10.146
CRR073298Stem 20.347
CRR073299Stem 30.000
CRR073300Leaf 10.038
CRR073301Leaf 20.035
CRR073302Leaf 30.017
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.142
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.020
CRR073309Second white 10.000
CRR073310Second white 20.008
CRR073311Second white 30.051
CRR073312Silver flowering 10.446
CRR073313Silver flowering 20.145
CRR073314Silver flowering 30.308
CRR073315Gold flowering 10.177
CRR073316Gold flowering 21.075
CRR073317Gold flowering 30.190
CRR073318Tawny withering 13.316
CRR073319Tawny withering 27.062
CRR073320Tawny withering 31.235