Detail information of GWHGAAZE028776


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002515541.11.2535E-49conserved hypothetical protein [Ricinus communis]
Swissprottr|Q9SD53|Y3720_ARATH2E-21UPF0481 protein At3g47200
trEMBLtr|B9RP72|B9RP72_RICCO5E-50Putative uncharacterized protein {ECO:0000313|EMBL:EEF46990.1}
TAIR10AT4G31980.18E-29Without detailed annotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene6858501868585707+
GWHAAZE00000008mRNA6858501868585707+
GWHAAZE00000008exon6858501868585707+
GWHAAZE00000008CDS6858501868585707+
Transcript Sequence

Network for GWHGAAZE028776

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0184


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03140.16DUF247542214.60E-50
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.774
SRR3591706second leaf2.020
SRR3591707mature leaf2.752
SRR3591708Shoot apex3.242
SRR3591709Stem2.537
SRR3591710White floral bud0.000
SRR3591711White flower0.000
SRR3591712Green floral bud0.000
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 4.424
SRR8316896Juvenile bud stage 4.230
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.670
SRR8316900Third green stage 0.212
SRR8316901Third green stage 0.483
SRR8316898Complete white stage 0.047
SRR8316899Complete white stage 4.909
SRR8316903Complete white stage 0.064
SRR8316902Silver flowering stage0.117
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.254
SRR8316908Gold flowering stage 0.433
SRP132670SRR6706286Control0.174
SRR6706287Light intensity 50%0.582
SRR6706288Light intensity 20%0.208
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.781
CNS0095593Slightly white alabastrum(diploid) 211.517
CNS0095594Slightly white alabastrum(diploid) 318.192
CNS0095595Whole white alabastrum(diploid) 26.985
CNS0095596Whole white alabastrum(diploid) 30.126
CNS0095597Whole white alabastrum(diploid) 42.132
CNS0095598Silvery flower (diploied) 17.746
CNS0095599Silvery flower (diploied) 27.028
CNS0095600Silvery flower (diploied) 31.939
CNS0095601Golden flower (diploid) 18.282
CNS0095602Golden flower (diploid) 26.374
CNS0095603Golden flower (diploid) 34.635
CNS0095604Slightly white alabastrum(tetraploid) 10.081
CNS0095605Slightly white alabastrum(tetraploid) 20.103
CNS0095606Slightly white alabastrum(tetraploid) 30.465
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.090
CNS0095610Silvery flower (tetraploid) 10.239
CNS0095611Silvery flower (tetraploid) 20.008
CNS0095612Silvery flower (tetraploid) 30.246
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.109
CNS0095615Golden flower (tetraploid) 30.008
CRA001975CRR073297Stem 12.350
CRR073298Stem 21.442
CRR073299Stem 30.553
CRR073300Leaf 10.169
CRR073301Leaf 20.738
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.000
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.057
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.008
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.177
CRR073316Gold flowering 20.024
CRR073317Gold flowering 31.436
CRR073318Tawny withering 11.377
CRR073319Tawny withering 23.797
CRR073320Tawny withering 30.306