Detail information of GWHGAAZE028777


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_003621330.14.45734E-47hypothetical protein MTR_7g011980 [Medicago truncatula]
trEMBLtr|G7L358|G7L358_MEDTR2E-47UPF0481 plant-like protein {ECO:0000313|EMBL:AES77548.1}
TAIR10AT2G44930.13E-27Plant protein of unknown function (DUF247)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene6858578668586379+
GWHAAZE00000008mRNA6858578668586379+
GWHAAZE00000008exon6858578668586379+
GWHAAZE00000008CDS6858578668586379+
Transcript Sequence

Network for GWHGAAZE028777

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0184


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03140.16DUF24771817.90E-55
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf2.149
SRR3591706second leaf0.731
SRR3591707mature leaf2.705
SRR3591708Shoot apex4.026
SRR3591709Stem2.348
SRR3591710White floral bud0.000
SRR3591711White flower0.000
SRR3591712Green floral bud0.000
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 1.386
SRR8316896Juvenile bud stage 2.374
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.207
SRR8316900Third green stage 0.077
SRR8316901Third green stage 0.443
SRR8316898Complete white stage 0.396
SRR8316899Complete white stage 3.101
SRR8316903Complete white stage 0.518
SRR8316902Silver flowering stage0.007
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.186
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.002
SRR6706287Light intensity 50%0.111
SRR6706288Light intensity 20%0.027
CNP0000432CNS0095592Slightly white alabastrum(diploid) 110.172
CNS0095593Slightly white alabastrum(diploid) 214.996
CNS0095594Slightly white alabastrum(diploid) 315.918
CNS0095595Whole white alabastrum(diploid) 26.371
CNS0095596Whole white alabastrum(diploid) 30.214
CNS0095597Whole white alabastrum(diploid) 42.400
CNS0095598Silvery flower (diploied) 13.286
CNS0095599Silvery flower (diploied) 25.758
CNS0095600Silvery flower (diploied) 31.772
CNS0095601Golden flower (diploid) 17.968
CNS0095602Golden flower (diploid) 22.840
CNS0095603Golden flower (diploid) 34.768
CNS0095604Slightly white alabastrum(tetraploid) 10.000
CNS0095605Slightly white alabastrum(tetraploid) 20.121
CNS0095606Slightly white alabastrum(tetraploid) 30.118
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.334
CNS0095611Silvery flower (tetraploid) 20.034
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.063
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.060
CRA001975CRR073297Stem 10.657
CRR073298Stem 20.434
CRR073299Stem 30.305
CRR073300Leaf 10.105
CRR073301Leaf 20.063
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.000
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.176
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.205
CRR073317Gold flowering 30.142
CRR073318Tawny withering 11.500
CRR073319Tawny withering 25.154
CRR073320Tawny withering 30.196