Detail information of GWHGAAZE028799


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAAT38805.12.48783E-07hypothetical protein SDM1_47t00008 [Solanum demissum]
trEMBLtr|Q6L3X8|Q6L3X8_SOLDE0.00000009Putative uncharacterized protein {ECO:0000313|EMBL:AAT38805.1}

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene6941021569413773-
GWHAAZE00000008mRNA6941021569413773-
GWHAAZE00000008exon6941021569410634-
GWHAAZE00000008exon6941338669413529-
GWHAAZE00000008exon6941368769413773-
GWHAAZE00000008CDS6941368769413773-
GWHAAZE00000008CDS6941338669413529-
GWHAAZE00000008CDS6941045869410634-
GWHAAZE00000008three_prime_UTR6941021569410457-
Transcript Sequence

Network for GWHGAAZE028799

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0040


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud0.000
SRR3591711White flower0.000
SRR3591712Green floral bud0.000
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 5.092
SRR8316896Juvenile bud stage 11.069
SRR8316897Juvenile bud stage 2.017
SRR8316894Third green stage 4.021
SRR8316900Third green stage 7.754
SRR8316901Third green stage 8.220
SRR8316898Complete white stage 2.856
SRR8316899Complete white stage 10.104
SRR8316903Complete white stage 5.391
SRR8316902Silver flowering stage3.294
SRR8316904Silver flowering stage7.532
SRR8316905Silver flowering stage2.579
SRR8316906Gold flowering stage 8.014
SRR8316907Gold flowering stage 7.827
SRR8316908Gold flowering stage 5.900
SRP132670SRR6706286Control5.434
SRR6706287Light intensity 50%5.207
SRR6706288Light intensity 20%5.792
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.072
CNS0095593Slightly white alabastrum(diploid) 23.615
CNS0095594Slightly white alabastrum(diploid) 36.777
CNS0095595Whole white alabastrum(diploid) 26.358
CNS0095596Whole white alabastrum(diploid) 36.989
CNS0095597Whole white alabastrum(diploid) 45.510
CNS0095598Silvery flower (diploied) 16.911
CNS0095599Silvery flower (diploied) 24.707
CNS0095600Silvery flower (diploied) 35.465
CNS0095601Golden flower (diploid) 15.549
CNS0095602Golden flower (diploid) 26.533
CNS0095603Golden flower (diploid) 34.010
CNS0095604Slightly white alabastrum(tetraploid) 10.000
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 17.999
CRR073298Stem 27.541
CRR073299Stem 33.110
CRR073300Leaf 17.095
CRR073301Leaf 26.321
CRR073302Leaf 33.220
CRR073303Juvenile bud 12.732
CRR073304Juvenile bud 22.254
CRR073305Juvenile bud 32.324
CRR073306Third green 10.422
CRR073307Third green 20.833
CRR073308Third green 30.762
CRR073309Second white 10.913
CRR073310Second white 20.674
CRR073311Second white 31.916
CRR073312Silver flowering 11.803
CRR073313Silver flowering 20.399
CRR073314Silver flowering 30.162
CRR073315Gold flowering 13.323
CRR073316Gold flowering 22.779
CRR073317Gold flowering 30.996
CRR073318Tawny withering 14.191
CRR073319Tawny withering 25.985
CRR073320Tawny withering 32.598