Detail information of GWHGAAZE028807


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010101269.12.41395E-09DEAD-box ATP-dependent RNA helicase 56 [Morus notabilis]
trEMBLtr|M0SHW6|M0SHW6_MUSAM2E-10Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P26000_001}

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene6952750369527619-
GWHAAZE00000008mRNA6952750369527619-
GWHAAZE00000008exon6952750369527619-
GWHAAZE00000008CDS6952750369527619-
Transcript Sequence

Network for GWHGAAZE028807

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K12812DDX39B, UAP56, SUB2 Spliceosome map03040
RNA transportmap03013
mRNA surveillance pathwaymap03015

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf7.515
SRR3591706second leaf0.932
SRR3591707mature leaf6.245
SRR3591708Shoot apex11.284
SRR3591709Stem3.809
SRR3591710White floral bud6.534
SRR3591711White flower3.916
SRR3591712Green floral bud3.424
SRR3591713Yellow flower0.833
SRP173429 SRR8316895Juvenile bud stage 11.749
SRR8316896Juvenile bud stage 12.029
SRR8316897Juvenile bud stage 9.564
SRR8316894Third green stage 8.968
SRR8316900Third green stage 18.301
SRR8316901Third green stage 12.244
SRR8316898Complete white stage 3.392
SRR8316899Complete white stage 16.866
SRR8316903Complete white stage 8.511
SRR8316902Silver flowering stage4.754
SRR8316904Silver flowering stage7.283
SRR8316905Silver flowering stage4.441
SRR8316906Gold flowering stage 12.631
SRR8316907Gold flowering stage 7.410
SRR8316908Gold flowering stage 19.327
SRP132670SRR6706286Control4.652
SRR6706287Light intensity 50%5.442
SRR6706288Light intensity 20%6.755
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.260
CNS0095593Slightly white alabastrum(diploid) 24.050
CNS0095594Slightly white alabastrum(diploid) 31.774
CNS0095595Whole white alabastrum(diploid) 21.427
CNS0095596Whole white alabastrum(diploid) 31.629
CNS0095597Whole white alabastrum(diploid) 44.117
CNS0095598Silvery flower (diploied) 16.501
CNS0095599Silvery flower (diploied) 27.148
CNS0095600Silvery flower (diploied) 34.371
CNS0095601Golden flower (diploid) 12.938
CNS0095602Golden flower (diploid) 25.176
CNS0095603Golden flower (diploid) 32.991
CNS0095604Slightly white alabastrum(tetraploid) 15.465
CNS0095605Slightly white alabastrum(tetraploid) 28.137
CNS0095606Slightly white alabastrum(tetraploid) 320.769
CNS0095607Whole white alabastrum(tetraploid) 11.209
CNS0095608Whole white alabastrum(tetraploid) 20.087
CNS0095609Whole white alabastrum(tetraploid) 310.829
CNS0095610Silvery flower (tetraploid) 19.015
CNS0095611Silvery flower (tetraploid) 28.469
CNS0095612Silvery flower (tetraploid) 312.582
CNS0095613Golden flower (tetraploid) 15.033
CNS0095614Golden flower (tetraploid) 26.189
CNS0095615Golden flower (tetraploid) 314.410
CRA001975CRR073297Stem 15.481
CRR073298Stem 29.677
CRR073299Stem 36.770
CRR073300Leaf 14.975
CRR073301Leaf 23.785
CRR073302Leaf 33.918
CRR073303Juvenile bud 12.931
CRR073304Juvenile bud 22.226
CRR073305Juvenile bud 34.325
CRR073306Third green 10.734
CRR073307Third green 20.018
CRR073308Third green 30.203
CRR073309Second white 10.853
CRR073310Second white 22.423
CRR073311Second white 31.599
CRR073312Silver flowering 13.322
CRR073313Silver flowering 21.725
CRR073314Silver flowering 31.896
CRR073315Gold flowering 15.276
CRR073316Gold flowering 212.131
CRR073317Gold flowering 35.473
CRR073318Tawny withering 14.249
CRR073319Tawny withering 22.587
CRR073320Tawny withering 37.185