Gene detail

Detail information of GWHGAAZE028839

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007223517.1	1.0163E-117	hypothetical protein PRUPE_ppa011918mg [Prunus persica]
COG	YP_004214034.1	5E-57	adenine phosphoribosyltransferase
Swissprot	tr\|Q9LFP0\|APT5_ARATH	4E-107	Adenine phosphoribosyltransferase 5
trEMBL	tr\|M5XGW0\|M5XGW0_PRUPE	4E-118	Uncharacterized protein {ECO:0000313\|EMBL:EMJ24716.1}
TAIR10	AT5G11160.1	6E-85	adenine phosphoribosyltransferase 5

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	70547541	70553669	-
GWHAAZE00000008	mRNA	70547541	70553669	-
GWHAAZE00000008	exon	70547541	70547666	-
GWHAAZE00000008	exon	70548699	70548757	-
GWHAAZE00000008	exon	70548849	70548998	-
GWHAAZE00000008	exon	70550486	70550578	-
GWHAAZE00000008	exon	70553029	70553139	-
GWHAAZE00000008	exon	70553579	70553669	-
GWHAAZE00000008	CDS	70553579	70553669	-
GWHAAZE00000008	CDS	70553029	70553139	-
GWHAAZE00000008	CDS	70550486	70550578	-
GWHAAZE00000008	CDS	70548849	70548998	-
GWHAAZE00000008	CDS	70548699	70548757	-
GWHAAZE00000008	CDS	70547541	70547666	-

Transcript Sequence
>GWHTAAZE028873 ATGTTTGCTGCAGAGAATGGACTCAAAGGAGACCCAAGGCTTGAAGCCATTTCTAAAGCCATTAGAGTCATCCCTCATTTCCCCAAACCAGGCATAATGTTTCAAGATATAACAACTTTGCTGCTAAATCACAAGGCATTCAAGGACACCGTTGACATCTTTGTTGATAGGTACAGAGACATGGATATCTCTGTTGTTGCTGGAATTGAAGCTAGAGGATTCTTGTTCGGTCCATCAATTGCCTTAGCTATTGGTGCAAAGTTTGTTCCTTTGCGTAAGCCTAGAAAGTTGCCAGGGGAAGTAATATCAGAAGCATATGAACTGGAGTACGGCACTGATTGTCTAGAGATGCATGTTGGTGCTGTTGAGGCCGGGGAACGGGCAGTCATAATTGACGATTTGGTAGCTACGGGTGGAACCCTATCTGCAGCTATAAAACTTTTAGAGCGTATGGGATCTGAAGTTGTTGAATGTGGATGTGTTATTGGAGTGCCTGAGGTCAAGGGTGGACAAAGTAGGCTAAATGGAAAACCGCTCTATATTCTTGTGGAGCCCAGTATAGAACATTGCTTGCAAGGTATTGGTCCCCTTTTCTTATGGAACGTGAATGAAGAAGATGCTGTCTTTTGA

Network for GWHGAAZE028839

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00156.28	Pribosyltran	55	165	5.70E-16

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00759	APRT, apt	Metabolic pathways	map01100
K00759	APRT, apt	Purine metabolism	map00230

Gene Ontology

GO term	Ontology	Name
GO:0006168	biological_process	adenine salvage
GO:0009116	biological_process	nucleoside metabolic process
GO:0005737	cellular_component	cytoplasm
GO:0003999	molecular_function	adenine phosphoribosyltransferase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	9.697
	SRR3591706	second leaf	4.083
	SRR3591707	mature leaf	5.588
	SRR3591708	Shoot apex	60.092
	SRR3591709	Stem	8.911
	SRR3591710	White floral bud	18.896
	SRR3591711	White flower	33.230
	SRR3591712	Green floral bud	3.759
	SRR3591713	Yellow flower	41.340
SRP173429	SRR8316895	Juvenile bud stage	1.593
	SRR8316896	Juvenile bud stage	1.945
	SRR8316897	Juvenile bud stage	1.491
	SRR8316894	Third green stage	1.463
	SRR8316900	Third green stage	2.094
	SRR8316901	Third green stage	1.148
	SRR8316898	Complete white stage	9.094
	SRR8316899	Complete white stage	1.523
	SRR8316903	Complete white stage	7.707
	SRR8316902	Silver flowering stage	16.444
	SRR8316904	Silver flowering stage	17.699
	SRR8316905	Silver flowering stage	11.281
	SRR8316906	Gold flowering stage	80.249
	SRR8316907	Gold flowering stage	87.441
	SRR8316908	Gold flowering stage	78.268
SRP132670	SRR6706286	Control	2.752
	SRR6706287	Light intensity 50%	2.276
	SRR6706288	Light intensity 20%	1.173
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	4.206
	CNS0095593	Slightly white alabastrum(diploid) 2	3.901
	CNS0095594	Slightly white alabastrum(diploid) 3	6.956
	CNS0095595	Whole white alabastrum(diploid) 2	3.251
	CNS0095596	Whole white alabastrum(diploid) 3	1.868
	CNS0095597	Whole white alabastrum(diploid) 4	2.163
	CNS0095598	Silvery flower (diploied) 1	39.575
	CNS0095599	Silvery flower (diploied) 2	45.548
	CNS0095600	Silvery flower (diploied) 3	61.433
	CNS0095601	Golden flower (diploid) 1	89.061
	CNS0095602	Golden flower (diploid) 2	106.350
	CNS0095603	Golden flower (diploid) 3	109.822
	CNS0095604	Slightly white alabastrum(tetraploid) 1	4.052
	CNS0095605	Slightly white alabastrum(tetraploid) 2	3.523
	CNS0095606	Slightly white alabastrum(tetraploid) 3	6.433
	CNS0095607	Whole white alabastrum(tetraploid) 1	1.900
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.434
	CNS0095609	Whole white alabastrum(tetraploid) 3	1.188
	CNS0095610	Silvery flower (tetraploid) 1	31.196
	CNS0095611	Silvery flower (tetraploid) 2	56.509
	CNS0095612	Silvery flower (tetraploid) 3	76.869
	CNS0095613	Golden flower (tetraploid) 1	50.030
	CNS0095614	Golden flower (tetraploid) 2	64.122
	CNS0095615	Golden flower (tetraploid) 3	123.872
CRA001975	CRR073297	Stem 1	5.461
	CRR073298	Stem 2	8.465
	CRR073299	Stem 3	6.812
	CRR073300	Leaf 1	4.137
	CRR073301	Leaf 2	3.908
	CRR073302	Leaf 3	2.051
	CRR073303	Juvenile bud 1	0.338
	CRR073304	Juvenile bud 2	1.052
	CRR073305	Juvenile bud 3	1.677
	CRR073306	Third green 1	5.455
	CRR073307	Third green 2	4.882
	CRR073308	Third green 3	3.803
	CRR073309	Second white 1	92.649
	CRR073310	Second white 2	101.207
	CRR073311	Second white 3	104.725
	CRR073312	Silver flowering 1	176.825
	CRR073313	Silver flowering 2	204.580
	CRR073314	Silver flowering 3	163.737
	CRR073315	Gold flowering 1	3.126
	CRR073316	Gold flowering 2	2.820
	CRR073317	Gold flowering 3	1.476
	CRR073318	Tawny withering 1	8.255
	CRR073319	Tawny withering 2	5.489
	CRR073320	Tawny withering 3	13.683