Detail information of GWHGAAZE028942


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrEYU20222.11.0579E-101hypothetical protein MIMGU_mgv1a013364mg [Erythranthe guttata]
Swissprottr|Q9LMP7|GOS11_ARATH7E-92Golgi SNAP receptor complex member 1-1
trEMBLtr|A0A022PUZ9|A0A022PUZ9_ERYGU4E-102Golgi SNAP receptor complex member 1 {ECO:0000256|PIRNR:PIRNR027109}
TAIR10AT1G15880.11E-73golgi snare 11

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene7353051273536082-
GWHAAZE00000008mRNA7353051273536082-
GWHAAZE00000008exon7353604473536082-
GWHAAZE00000008exon7353386073534150-
GWHAAZE00000008exon7353324273533415-
GWHAAZE00000008exon7353051273530646-
GWHAAZE00000008CDS7353604473536082-
GWHAAZE00000008CDS7353386073534150-
GWHAAZE00000008CDS7353324273533415-
GWHAAZE00000008CDS7353051273530646-
Transcript Sequence

Network for GWHGAAZE028942

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12352.9V-SNARE_C1542093.40E-14
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K08495GOSR1, GOS1 SNARE interactions in vesicular transport map04130

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf33.025
SRR3591706second leaf9.470
SRR3591707mature leaf8.272
SRR3591708Shoot apex11.951
SRR3591709Stem38.689
SRR3591710White floral bud40.383
SRR3591711White flower42.172
SRR3591712Green floral bud23.393
SRR3591713Yellow flower34.407
SRP173429 SRR8316895Juvenile bud stage 5.409
SRR8316896Juvenile bud stage 12.541
SRR8316897Juvenile bud stage 4.408
SRR8316894Third green stage 6.878
SRR8316900Third green stage 19.322
SRR8316901Third green stage 20.366
SRR8316898Complete white stage 24.422
SRR8316899Complete white stage 25.957
SRR8316903Complete white stage 33.517
SRR8316902Silver flowering stage31.805
SRR8316904Silver flowering stage42.498
SRR8316905Silver flowering stage24.936
SRR8316906Gold flowering stage 75.868
SRR8316907Gold flowering stage 67.451
SRR8316908Gold flowering stage 62.304
SRP132670SRR6706286Control16.017
SRR6706287Light intensity 50%16.714
SRR6706288Light intensity 20%19.977
CNP0000432CNS0095592Slightly white alabastrum(diploid) 112.179
CNS0095593Slightly white alabastrum(diploid) 214.059
CNS0095594Slightly white alabastrum(diploid) 311.642
CNS0095595Whole white alabastrum(diploid) 214.788
CNS0095596Whole white alabastrum(diploid) 317.532
CNS0095597Whole white alabastrum(diploid) 413.414
CNS0095598Silvery flower (diploied) 115.812
CNS0095599Silvery flower (diploied) 214.362
CNS0095600Silvery flower (diploied) 337.212
CNS0095601Golden flower (diploid) 114.467
CNS0095602Golden flower (diploid) 223.341
CNS0095603Golden flower (diploid) 322.406
CNS0095604Slightly white alabastrum(tetraploid) 113.105
CNS0095605Slightly white alabastrum(tetraploid) 213.852
CNS0095606Slightly white alabastrum(tetraploid) 318.293
CNS0095607Whole white alabastrum(tetraploid) 115.092
CNS0095608Whole white alabastrum(tetraploid) 217.279
CNS0095609Whole white alabastrum(tetraploid) 314.792
CNS0095610Silvery flower (tetraploid) 131.310
CNS0095611Silvery flower (tetraploid) 233.216
CNS0095612Silvery flower (tetraploid) 371.591
CNS0095613Golden flower (tetraploid) 129.194
CNS0095614Golden flower (tetraploid) 225.225
CNS0095615Golden flower (tetraploid) 356.020
CRA001975CRR073297Stem 110.944
CRR073298Stem 29.358
CRR073299Stem 38.847
CRR073300Leaf 113.348
CRR073301Leaf 211.476
CRR073302Leaf 317.510
CRR073303Juvenile bud 113.102
CRR073304Juvenile bud 215.473
CRR073305Juvenile bud 37.704
CRR073306Third green 138.368
CRR073307Third green 234.501
CRR073308Third green 334.350
CRR073309Second white 128.834
CRR073310Second white 242.523
CRR073311Second white 333.969
CRR073312Silver flowering 118.219
CRR073313Silver flowering 216.111
CRR073314Silver flowering 319.524
CRR073315Gold flowering 16.976
CRR073316Gold flowering 26.838
CRR073317Gold flowering 33.661
CRR073318Tawny withering 118.704
CRR073319Tawny withering 29.478
CRR073320Tawny withering 320.669