Detail information of GWHGAAZE028987


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIR10AT2G40140.20.003zinc finger (CCCH-type) family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene843236843832-
GWHAAZE00000009mRNA843236843832-
GWHAAZE00000009exon843236843832-
GWHAAZE00000009CDS843236843832-
Transcript Sequence

Network for GWHGAAZE028987

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0040


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.743
SRR3591706second leaf0.138
SRR3591707mature leaf0.026
SRR3591708Shoot apex0.137
SRR3591709Stem0.593
SRR3591710White floral bud0.570
SRR3591711White flower0.711
SRR3591712Green floral bud0.186
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 3.811
SRR8316896Juvenile bud stage 4.115
SRR8316897Juvenile bud stage 1.838
SRR8316894Third green stage 1.878
SRR8316900Third green stage 3.831
SRR8316901Third green stage 3.192
SRR8316898Complete white stage 0.637
SRR8316899Complete white stage 3.262
SRR8316903Complete white stage 1.893
SRR8316902Silver flowering stage1.631
SRR8316904Silver flowering stage3.152
SRR8316905Silver flowering stage1.507
SRR8316906Gold flowering stage 2.763
SRR8316907Gold flowering stage 3.705
SRR8316908Gold flowering stage 2.078
SRP132670SRR6706286Control3.078
SRR6706287Light intensity 50%3.298
SRR6706288Light intensity 20%3.011
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.866
CNS0095593Slightly white alabastrum(diploid) 21.701
CNS0095594Slightly white alabastrum(diploid) 31.346
CNS0095595Whole white alabastrum(diploid) 21.626
CNS0095596Whole white alabastrum(diploid) 30.527
CNS0095597Whole white alabastrum(diploid) 42.368
CNS0095598Silvery flower (diploied) 14.005
CNS0095599Silvery flower (diploied) 22.030
CNS0095600Silvery flower (diploied) 33.424
CNS0095601Golden flower (diploid) 12.082
CNS0095602Golden flower (diploid) 22.778
CNS0095603Golden flower (diploid) 32.399
CNS0095604Slightly white alabastrum(tetraploid) 10.000
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 12.755
CRR073298Stem 21.596
CRR073299Stem 30.009
CRR073300Leaf 12.109
CRR073301Leaf 23.485
CRR073302Leaf 30.041
CRR073303Juvenile bud 10.271
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 31.003
CRR073306Third green 10.012
CRR073307Third green 20.000
CRR073308Third green 30.226
CRR073309Second white 10.351
CRR073310Second white 20.000
CRR073311Second white 30.907
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 21.413
CRR073317Gold flowering 30.054
CRR073318Tawny withering 10.708
CRR073319Tawny withering 20.584
CRR073320Tawny withering 30.518