Gene detail

Detail information of GWHGAAZE029019

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_002270732.2	0	PREDICTED: NADPH--cytochrome P450 reductase [Vitis vinifera]
COG	NP_391224.1	3E-86	sulfite reductase
Swissprot	tr\|Q05001\|NCPR_CATRO	0	NADPH--cytochrome P450 reductase
trEMBL	tr\|F6GXH0\|F6GXH0_VITVI	0	NADPH--cytochrome P450 reductase {ECO:0000256\|PIRNR:PIRNR000208}
TAIR10	AT4G30210.2	0	P450 reductase 2

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	2456738	2464203	+
GWHAAZE00000009	mRNA	2456738	2464203	+
GWHAAZE00000009	exon	2456738	2457079	+
GWHAAZE00000009	exon	2457714	2457773	+
GWHAAZE00000009	exon	2457889	2457965	+
GWHAAZE00000009	exon	2458514	2458571	+
GWHAAZE00000009	exon	2458854	2458937	+
GWHAAZE00000009	exon	2459058	2459094	+
GWHAAZE00000009	exon	2459340	2459409	+
GWHAAZE00000009	exon	2459554	2459745	+
GWHAAZE00000009	exon	2459838	2459930	+
GWHAAZE00000009	exon	2460527	2460752	+
GWHAAZE00000009	exon	2460849	2460932	+
GWHAAZE00000009	exon	2461021	2461172	+
GWHAAZE00000009	exon	2461276	2461372	+
GWHAAZE00000009	exon	2461529	2461756	+
GWHAAZE00000009	exon	2461994	2462116	+
GWHAAZE00000009	exon	2462231	2462344	+
GWHAAZE00000009	exon	2463995	2464203	+
GWHAAZE00000009	CDS	2456738	2457079	+
GWHAAZE00000009	CDS	2457714	2457773	+
GWHAAZE00000009	CDS	2457889	2457965	+
GWHAAZE00000009	CDS	2458514	2458571	+
GWHAAZE00000009	CDS	2458854	2458937	+
GWHAAZE00000009	CDS	2459058	2459094	+
GWHAAZE00000009	CDS	2459340	2459409	+
GWHAAZE00000009	CDS	2459554	2459745	+
GWHAAZE00000009	CDS	2459838	2459930	+
GWHAAZE00000009	CDS	2460527	2460752	+
GWHAAZE00000009	CDS	2460849	2460932	+
GWHAAZE00000009	CDS	2461021	2461172	+
GWHAAZE00000009	CDS	2461276	2461372	+
GWHAAZE00000009	CDS	2461529	2461756	+
GWHAAZE00000009	CDS	2461994	2462116	+
GWHAAZE00000009	CDS	2462231	2462344	+
GWHAAZE00000009	CDS	2463995	2464075	+
GWHAAZE00000009	three_prime_UTR	2464076	2464203	+

Transcript Sequence
>GWHTAAZE029053 ATGCAATCCGAGTCGATGAAGTTATCGCCCTTCGACTTGATGTCCGCCATTTTGAGAGGAGGCAGCATGGGCCAGTCTTCTGATTCGGACGAGTCGGTTTTCGCGACGTTGGTGGATAATAAGGAGCTTATGATGATACTGACTACGTCGGTCGCGGTTTTGATCGGATGCGCTGTTGTGTTGGTGTGGAAGAGATCGTCCGGGCGGAGATCGGCGAAAGTATTTGAGGCACCGAAGGTTGTGACGGCGAAGGTGGAGCCGGAGGTGGAGGTAGATGACGGTAAGAAGAAGGTTACCATCTTTTACGGGACTCAGACTGGTACCGCGGAAGGTTTTGCCAAGGCACTTGCCGATGAAGCCAAAGTTCGCTATGAAAAGGCAGCATTTAAAGTGGTGGATTTGGACGACTATGCTGCCGATGACGAGGAGTATGAGGACAAGTTGAAGAAAGAAAATATGGCCTTTTTCTTCTTAGCTACATATGGAGATGGTGAGCCAACTGACAATGCTGCTAGATTCTACAAGTGGTTTACAGAGGGAAAAGAAAAGGGGGATTCGCTTAAGAATCTTGAATACGCGGTATTTGGCCTAGGCAACAGGCAATATGAGCATTTCAACAAGATTGCGAAGGAGGTGGACAATACGATTTTTGATCAGGGTGGAAAGCGCATTGTTCCGGTGGGTCTTGGAGATGATGATCAATGCATTGAAGATGACTTTGCCGCATGGCGGGAGTTGTTGTGGCCGGAGTTAGATCAATTGCTTCGGGGTGATGATGATGCAACTGTTGCTACTCCTTACACTGCTACTGTTTTGGAATACTGGGTTGTATTGCACGACGAAACAGATACATCTCTGCTCGATCAGAGCTTGAGTAAATCAAATGGCCATTCGGTCTATGATGCTCAACATCCTTGCAGAGCTAACGTGGCTGTGAAAAGGGAACTTCATACCCCCGCATCAGATCGTTCTTGCACTCATTTGGAATTTGACATTTCTCACTCCGGACTTGCATACGAAACTGGGGATCATGTTGGTGTCTATTGCGAGAATCTGATTGAGACCGTGGAGGCGGCTGAGAAATTGTTAGGTGTATCGCCCGACACTTATTTCTCCATTCATACCGACAAAGAGGACGGAACACCAATTAGTGGAAGCTCATTGCCACCTCCATTCCCACCTTGCACCTTAAGAACCGCACTAACCAAATACGCGGACCTTCTTAGTTCTCCCAAAAAGTCTGCTCTACTTGCTCTAGCAGCCCACACCTCAGACCCTACTGAAGCTGATCGATTAAGATATCTTGCATCCCCTGCTGGAAAGGATGAGTATGCTCAGTGGGTAGTTTCAAATCAGAGAAGCCTCCTTGAGGTCATGGCAGAATTCCCATCAGCCAAGCCCTCGCTAGGAGTTTTCTTTGCGGCAATTGCCCCACGTTTGCAGCCCCGATATTATTCTATCTCTTCTTCTCCAAGCATGGCACCATCGCGAATCCATGTTACTTGTGCATTAGTTTACGAAAAAACACCTACAGGAAGGATTCACAAAGGAGTGTGCTCTACTTGGATGAAGAATGCTGTGCCTCTTGGGGAAAGCAATGACTGCAGCTGGGCACCAATTTTTGTTAGGCAATCTAACTTCAAACTCCCTGCCGATACTAAAGTGCCTATTATAATGATCGGGCCTGGCACCGGGTTCGCTCCTTTTAGGGGCTTCCTTCAAGAAAGACTAGCTCTAAAAGAAGCTGGAGCGGAGCTTGGACCGGCCACATTATTCTTCGGATGCAGAAATCGAAAAATCGATTATATCTATGAGGGTGAGCTAAACAATTTTGTCGAAACCGGGGCACTTACTGAGCTAGTTGTGGCATTTTCGCGCGAAGGCCCTACTAAGGAATACGTGCAACATAAGATGGCGCAGAAGGCTTCGGATATATGGAAGTTGATTTCGGAGGGAGCATATGTTTATGTTTGTGGCGATGCCAAAGGCATGGCCAGGGACGTCCACCGAACTCTCCACACTATCGCGCAAGAGCAGGGATCTCTAGATAGCACTCAGGCAGAGAGCATGGTGAAGAATCTACAAATGAATGGGAGGTATTTGCGTGATGTTTGGTAATAATATTATTATTATTACCATTCAATTCATTGGGTTCTTGTAGAAATTATTATATTACCAATAGTTGAGGAATGAAAACAAAGCATAAAGTACTGGAGGAATTGAAGGCAAGAGAAAAGAGCTACCGA

Network for GWHGAAZE029019

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00258.26	Flavodoxin_1	100	243	9.40E-33
PF00667.21	FAD_binding_1	301	522	3.80E-69
PF00175.22	NAD_binding_1	559	669	6.10E-16

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0016491	molecular_function	oxidoreductase activity
GO:0010181	molecular_function	FMN binding
GO:0003958	molecular_function	NADPH-hemoprotein reductase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	29.232
	SRR3591706	second leaf	21.985
	SRR3591707	mature leaf	15.114
	SRR3591708	Shoot apex	11.331
	SRR3591709	Stem	33.866
	SRR3591710	White floral bud	23.089
	SRR3591711	White flower	26.376
	SRR3591712	Green floral bud	7.276
	SRR3591713	Yellow flower	42.614
SRP173429	SRR8316895	Juvenile bud stage	14.508
	SRR8316896	Juvenile bud stage	23.249
	SRR8316897	Juvenile bud stage	5.775
	SRR8316894	Third green stage	6.369
	SRR8316900	Third green stage	11.821
	SRR8316901	Third green stage	21.020
	SRR8316898	Complete white stage	12.286
	SRR8316899	Complete white stage	29.893
	SRR8316903	Complete white stage	19.366
	SRR8316902	Silver flowering stage	22.885
	SRR8316904	Silver flowering stage	26.597
	SRR8316905	Silver flowering stage	10.464
	SRR8316906	Gold flowering stage	87.254
	SRR8316907	Gold flowering stage	66.766
	SRR8316908	Gold flowering stage	118.252
SRP132670	SRR6706286	Control	16.300
	SRR6706287	Light intensity 50%	23.240
	SRR6706288	Light intensity 20%	15.885
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	25.581
	CNS0095593	Slightly white alabastrum(diploid) 2	26.460
	CNS0095594	Slightly white alabastrum(diploid) 3	33.123
	CNS0095595	Whole white alabastrum(diploid) 2	39.933
	CNS0095596	Whole white alabastrum(diploid) 3	6.908
	CNS0095597	Whole white alabastrum(diploid) 4	24.756
	CNS0095598	Silvery flower (diploied) 1	18.833
	CNS0095599	Silvery flower (diploied) 2	17.812
	CNS0095600	Silvery flower (diploied) 3	27.320
	CNS0095601	Golden flower (diploid) 1	18.183
	CNS0095602	Golden flower (diploid) 2	36.908
	CNS0095603	Golden flower (diploid) 3	34.892
	CNS0095604	Slightly white alabastrum(tetraploid) 1	7.072
	CNS0095605	Slightly white alabastrum(tetraploid) 2	4.700
	CNS0095606	Slightly white alabastrum(tetraploid) 3	11.938
	CNS0095607	Whole white alabastrum(tetraploid) 1	7.434
	CNS0095608	Whole white alabastrum(tetraploid) 2	6.989
	CNS0095609	Whole white alabastrum(tetraploid) 3	7.280
	CNS0095610	Silvery flower (tetraploid) 1	20.128
	CNS0095611	Silvery flower (tetraploid) 2	8.007
	CNS0095612	Silvery flower (tetraploid) 3	42.484
	CNS0095613	Golden flower (tetraploid) 1	35.856
	CNS0095614	Golden flower (tetraploid) 2	33.856
	CNS0095615	Golden flower (tetraploid) 3	28.615
CRA001975	CRR073297	Stem 1	14.207
	CRR073298	Stem 2	11.216
	CRR073299	Stem 3	7.991
	CRR073300	Leaf 1	20.154
	CRR073301	Leaf 2	21.336
	CRR073302	Leaf 3	16.097
	CRR073303	Juvenile bud 1	12.711
	CRR073304	Juvenile bud 2	22.253
	CRR073305	Juvenile bud 3	20.566
	CRR073306	Third green 1	86.511
	CRR073307	Third green 2	32.375
	CRR073308	Third green 3	52.989
	CRR073309	Second white 1	28.118
	CRR073310	Second white 2	53.752
	CRR073311	Second white 3	62.140
	CRR073312	Silver flowering 1	128.950
	CRR073313	Silver flowering 2	84.021
	CRR073314	Silver flowering 3	131.959
	CRR073315	Gold flowering 1	22.250
	CRR073316	Gold flowering 2	44.871
	CRR073317	Gold flowering 3	20.200
	CRR073318	Tawny withering 1	81.627
	CRR073319	Tawny withering 2	167.581
	CRR073320	Tawny withering 3	103.398