Detail information of GWHGAAZE029022


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDO43866.13.89178E-52hypothetical protein CISIN_1g027161mg [Citrus sinensis]
trEMBLtr|A0A067DZ13|A0A067DZ13_CITSI1E-52Uncharacterized protein {ECO:0000313|EMBL:KDO43866.1}
TAIR10AT5G57410.31E-32Afadin/alpha-actinin-binding protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene25494902550226-
GWHAAZE00000009mRNA25494902550226-
GWHAAZE00000009exon25494902549621-
GWHAAZE00000009exon25497212549798-
GWHAAZE00000009exon25500802550226-
GWHAAZE00000009CDS25500802550226-
GWHAAZE00000009CDS25497212549798-
GWHAAZE00000009CDS25494902549621-
Transcript Sequence

Network for GWHGAAZE029022

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06085SSX2IP, ADIP Adherens junction map04520

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf6.515
SRR3591706second leaf2.492
SRR3591707mature leaf0.415
SRR3591708Shoot apex14.370
SRR3591709Stem0.212
SRR3591710White floral bud6.166
SRR3591711White flower1.598
SRR3591712Green floral bud7.487
SRR3591713Yellow flower0.223
SRP173429 SRR8316895Juvenile bud stage 4.107
SRR8316896Juvenile bud stage 3.955
SRR8316897Juvenile bud stage 4.534
SRR8316894Third green stage 0.701
SRR8316900Third green stage 0.000
SRR8316901Third green stage 1.026
SRR8316898Complete white stage 0.127
SRR8316899Complete white stage 0.573
SRR8316903Complete white stage 0.649
SRR8316902Silver flowering stage0.154
SRR8316904Silver flowering stage0.037
SRR8316905Silver flowering stage0.096
SRR8316906Gold flowering stage 0.225
SRR8316907Gold flowering stage 0.099
SRR8316908Gold flowering stage 0.071
SRP132670SRR6706286Control0.620
SRR6706287Light intensity 50%1.991
SRR6706288Light intensity 20%0.430
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.669
CNS0095593Slightly white alabastrum(diploid) 20.712
CNS0095594Slightly white alabastrum(diploid) 34.032
CNS0095595Whole white alabastrum(diploid) 21.448
CNS0095596Whole white alabastrum(diploid) 33.964
CNS0095597Whole white alabastrum(diploid) 40.000
CNS0095598Silvery flower (diploied) 11.488
CNS0095599Silvery flower (diploied) 23.089
CNS0095600Silvery flower (diploied) 30.114
CNS0095601Golden flower (diploid) 10.902
CNS0095602Golden flower (diploid) 20.492
CNS0095603Golden flower (diploid) 30.155
CNS0095604Slightly white alabastrum(tetraploid) 14.560
CNS0095605Slightly white alabastrum(tetraploid) 22.996
CNS0095606Slightly white alabastrum(tetraploid) 33.255
CNS0095607Whole white alabastrum(tetraploid) 11.877
CNS0095608Whole white alabastrum(tetraploid) 21.133
CNS0095609Whole white alabastrum(tetraploid) 31.902
CNS0095610Silvery flower (tetraploid) 10.715
CNS0095611Silvery flower (tetraploid) 20.134
CNS0095612Silvery flower (tetraploid) 30.219
CNS0095613Golden flower (tetraploid) 10.029
CNS0095614Golden flower (tetraploid) 20.212
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 11.325
CRR073298Stem 20.105
CRR073299Stem 37.430
CRR073300Leaf 10.000
CRR073301Leaf 21.159
CRR073302Leaf 32.132
CRR073303Juvenile bud 10.680
CRR073304Juvenile bud 20.796
CRR073305Juvenile bud 30.069
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.655
CRR073309Second white 10.214
CRR073310Second white 20.148
CRR073311Second white 30.064
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 11.626
CRR073316Gold flowering 20.674
CRR073317Gold flowering 30.024
CRR073318Tawny withering 13.706
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.070