Detail information of GWHGAAZE029023


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002533091.11.22833E-71Afadin- and alpha-actinin-binding protein, putative [Ricinus communis]
trEMBLtr|B9T4C2|B9T4C2_RICCO5E-72Afadin-and alpha-actinin-binding protein, putative {ECO:0000313|EMBL:EEF29293.1}
TAIR10AT5G57410.23E-59Afadin/alpha-actinin-binding protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene25580592559631-
GWHAAZE00000009mRNA25580592559631-
GWHAAZE00000009exon25580592558112-
GWHAAZE00000009exon25581902558255-
GWHAAZE00000009exon25583412558409-
GWHAAZE00000009exon25585482558610-
GWHAAZE00000009exon25587082558853-
GWHAAZE00000009exon25594352559573-
GWHAAZE00000009exon25596292559631-
GWHAAZE00000009CDS25596292559631-
GWHAAZE00000009CDS25594352559573-
GWHAAZE00000009CDS25587082558853-
GWHAAZE00000009CDS25585482558610-
GWHAAZE00000009CDS25583412558409-
GWHAAZE00000009CDS25581902558255-
GWHAAZE00000009CDS25580592558112-
Transcript Sequence

Network for GWHGAAZE029023

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF11559.9ADIP31168.60E-19
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K06085SSX2IP, ADIP Adherens junction map04520

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.173
SRR3591706second leaf4.797
SRR3591707mature leaf0.392
SRR3591708Shoot apex6.818
SRR3591709Stem1.186
SRR3591710White floral bud3.451
SRR3591711White flower1.522
SRR3591712Green floral bud7.006
SRR3591713Yellow flower1.332
SRP173429 SRR8316895Juvenile bud stage 1.248
SRR8316896Juvenile bud stage 1.323
SRR8316897Juvenile bud stage 2.856
SRR8316894Third green stage 1.671
SRR8316900Third green stage 3.953
SRR8316901Third green stage 2.654
SRR8316898Complete white stage 0.935
SRR8316899Complete white stage 0.582
SRR8316903Complete white stage 0.961
SRR8316902Silver flowering stage0.064
SRR8316904Silver flowering stage0.132
SRR8316905Silver flowering stage0.261
SRR8316906Gold flowering stage 0.378
SRR8316907Gold flowering stage 0.271
SRR8316908Gold flowering stage 0.247
SRP132670SRR6706286Control0.977
SRR6706287Light intensity 50%1.622
SRR6706288Light intensity 20%0.829
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.519
CNS0095593Slightly white alabastrum(diploid) 22.606
CNS0095594Slightly white alabastrum(diploid) 31.836
CNS0095595Whole white alabastrum(diploid) 22.423
CNS0095596Whole white alabastrum(diploid) 32.038
CNS0095597Whole white alabastrum(diploid) 41.531
CNS0095598Silvery flower (diploied) 12.232
CNS0095599Silvery flower (diploied) 20.468
CNS0095600Silvery flower (diploied) 30.358
CNS0095601Golden flower (diploid) 10.361
CNS0095602Golden flower (diploid) 20.582
CNS0095603Golden flower (diploid) 30.209
CNS0095604Slightly white alabastrum(tetraploid) 13.114
CNS0095605Slightly white alabastrum(tetraploid) 20.838
CNS0095606Slightly white alabastrum(tetraploid) 36.036
CNS0095607Whole white alabastrum(tetraploid) 12.024
CNS0095608Whole white alabastrum(tetraploid) 20.864
CNS0095609Whole white alabastrum(tetraploid) 31.131
CNS0095610Silvery flower (tetraploid) 10.299
CNS0095611Silvery flower (tetraploid) 20.234
CNS0095612Silvery flower (tetraploid) 30.792
CNS0095613Golden flower (tetraploid) 10.269
CNS0095614Golden flower (tetraploid) 20.983
CNS0095615Golden flower (tetraploid) 30.051
CRA001975CRR073297Stem 10.304
CRR073298Stem 24.358
CRR073299Stem 33.662
CRR073300Leaf 10.475
CRR073301Leaf 22.144
CRR073302Leaf 32.499
CRR073303Juvenile bud 10.993
CRR073304Juvenile bud 20.380
CRR073305Juvenile bud 31.168
CRR073306Third green 10.912
CRR073307Third green 20.088
CRR073308Third green 30.363
CRR073309Second white 10.443
CRR073310Second white 20.037
CRR073311Second white 30.079
CRR073312Silver flowering 10.043
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.120
CRR073315Gold flowering 10.081
CRR073316Gold flowering 21.107
CRR073317Gold flowering 30.364
CRR073318Tawny withering 11.793
CRR073319Tawny withering 20.722
CRR073320Tawny withering 31.985