Gene detail

Detail information of GWHGAAZE029147

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011099164.1	1.4583E-138	PREDICTED: putative receptor-like protein kinase At5g39000 [Sesamum indicum]
COG	YP_001958461.1	7E-26	hypothetical protein Aasi_1443
Swissprot	tr\|Q9SCZ4\|FERON_ARATH	1E-105	Receptor-like protein kinase FERONIA (Precursor)
trEMBL	tr\|A0A068U2D1\|A0A068U2D1_COFCA	5E-129	Coffea canephora DH200=94 genomic scaffold, scaffold_8 {ECO:0000313\|EMBL:CDP02334.1}
TAIR10	AT3G51550.1	2E-94	Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	8713548	8716299	-
GWHAAZE00000009	mRNA	8713548	8716299	-
GWHAAZE00000009	exon	8713548	8713862	-
GWHAAZE00000009	exon	8714262	8714425	-
GWHAAZE00000009	exon	8714874	8716299	-
GWHAAZE00000009	CDS	8714874	8716299	-
GWHAAZE00000009	CDS	8714262	8714425	-
GWHAAZE00000009	CDS	8713548	8713862	-

Transcript Sequence
>GWHTAAZE029181 ATGGGCTTCCATTTTGGCATTGTCAATATGATTGCAACTGCAGTGATAATTATAATCACTATATTGAATATCATTGTCTATAAACTTCGACAACTTCACGAAGCAAACTTTTCCAAGAATTCAGACATTTCATCATCCCAACAAATAGCAGAAGCAAACCTTGCCGAGAATTTACAAGTATTAACACCGCAACAACACCAGGAAGTGAACCTTGGCGAGGATTCAAGCATACCACCGTCGTTGAAATCAGAACAATTATGCCGTCACTTTTCACTTGCTCGTATCCTATTGGCCACCAACAACTTTGACGATGCATTAATCATTGGTCACGGTGGGTTTGGGAAGGTGTACAAAGGGGTCATCGATGATGGGACAGTTACCGTCGCCATAAAGAGGTTAAGTCCTACGTCCAAACAAGGGGCACCCCAGTTTTGGACAGAGGTGGAGTTGCTTTCTAAATTTCGGCACAGCCATCTTGTTTCATTGATTGGTTACTGTAACAATCGCGATGAGATGATACTTGTTTATGAGTACATGGCTCGTGGATCCCTCGCGGATCATCTGTACAAACTTGGTCCGAATGGTAATAATTCTCTAACCTTGTCTTGGGTGCAGCGCGTAAAGATTTGCATTGGGGCAGCACAGGGTTTGGATTACCTTCATACCGGTACGGGTATCCATGATAGGGTCATACATCGTGACTTGAAGAGCTCAAACATTCTATTGGACGATAGCTGGGCAGCTAAGGTATCAGATTTCGGGCTGTCTAAAATTGGCCCCACAAATCAGTCCGCCTCCGCCTCATCACATGTCAGTACCAACGTCAAAGGTACATTCGGGTATGTGGATCCTGAGTATTTGGTGACCCATAGACTCACTCGAAAGTCTGACGTTTACTCCTATGGCGTAGTCTTGTTAGAAGTGTTGTCCGGGAGGCGGGCTGTAGATTTAAAACGCTGTGAGGAGCAGTGGGGTCTTGCTGGATGGGCCAAAGAATGCATAAAGAAAGGAGAACTAGATCAGATTATTGACCCGAATTTGAGATGGCAAATCTTGCCAAGTTCTTTGTCAGCATTTGTGAAAATAGCAAATCAATGCTTGCATTATCGTTCGAAAAAACGCCCTACAATGGCTGAGGTGGTGGCCTCGCTTGAGTCCGCATTGGCATTGCAAGAGAGAAGAGATTCTTCAATATTTGAGGCGGATTTTTTGAATTTAGGAGGGACTTTTGACAACCAAGAGAATCTGGATAATTCCTTACTAGAATCCGAGGTGAATAATGGTGGTAATGGTGAGCATCTGGGCGAAGAGATAGATAATATTGTGTCATCTGGTGAGGCAAGCAATTTGCAGACGCGTGAAAGGCCTGCCAGAATGACACCGTTCAAAAGGATGGCGCGGCTGTTTTTCTTTGGGAAATCTCGAGCAGCAAGTGAAATAAGCAACTTGGAATCCCTACGACATGACTTCGGTAGCATTAGAAGCAACTCGGAATCCCTACAATATGACTTTGGTACACTTAGGGTTGCGACAGATAATTTCTCTGATGCTAACAAGCTCGGAAATGGTGCATATGGAGATGTGTTCATGTATATTACCATCTCTCAAACTTTAGGTTATTTAAATGAAGCTCTTACTAAGAAATTTTCTTTCGTTGGGTGTGCAGATCCAATCAAGCGTGCAACCTTGGATTGGGAACGGCGTTATAAAATCATAAGAGGTGTTGCTCGGGGGCTTCTTTATCTTCATGAAGATTCTCCCGTGCGGATTATTCATTGTCTTGTCAAACCTAGCAGCATTCTATTAGATGCAGAGATGAACCCGAAAATTTCTGGTTTTTGCTTCGCAAAGTTGTGTGATTGGGAAGGAAGCGAAGGGCCTGTAACCAATCTTAGGGGGACTTAG

Network for GWHGAAZE029147

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07714.18	PK_Tyr_Ser-Thr	108	384	1.80E-47

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.166
	SRR3591706	second leaf	0.181
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.173
	SRR3591709	Stem	0.371
	SRR3591710	White floral bud	0.105
	SRR3591711	White flower	0.173
	SRR3591712	Green floral bud	0.014
	SRR3591713	Yellow flower	0.104
SRP173429	SRR8316895	Juvenile bud stage	0.508
	SRR8316896	Juvenile bud stage	0.591
	SRR8316897	Juvenile bud stage	2.300
	SRR8316894	Third green stage	0.292
	SRR8316900	Third green stage	0.245
	SRR8316901	Third green stage	0.140
	SRR8316898	Complete white stage	0.111
	SRR8316899	Complete white stage	0.432
	SRR8316903	Complete white stage	0.050
	SRR8316902	Silver flowering stage	0.232
	SRR8316904	Silver flowering stage	0.252
	SRR8316905	Silver flowering stage	0.177
	SRR8316906	Gold flowering stage	0.569
	SRR8316907	Gold flowering stage	0.234
	SRR8316908	Gold flowering stage	0.633
SRP132670	SRR6706286	Control	0.362
	SRR6706287	Light intensity 50%	0.573
	SRR6706288	Light intensity 20%	0.414
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.304
	CNS0095593	Slightly white alabastrum(diploid) 2	0.419
	CNS0095594	Slightly white alabastrum(diploid) 3	0.160
	CNS0095595	Whole white alabastrum(diploid) 2	0.240
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.204
	CNS0095598	Silvery flower (diploied) 1	0.668
	CNS0095599	Silvery flower (diploied) 2	0.651
	CNS0095600	Silvery flower (diploied) 3	0.597
	CNS0095601	Golden flower (diploid) 1	0.846
	CNS0095602	Golden flower (diploid) 2	0.986
	CNS0095603	Golden flower (diploid) 3	1.007
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.046
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.007
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.138
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.000
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.000
	CNS0095610	Silvery flower (tetraploid) 1	0.087
	CNS0095611	Silvery flower (tetraploid) 2	0.041
	CNS0095612	Silvery flower (tetraploid) 3	0.076
	CNS0095613	Golden flower (tetraploid) 1	0.032
	CNS0095614	Golden flower (tetraploid) 2	0.019
	CNS0095615	Golden flower (tetraploid) 3	0.096
CRA001975	CRR073297	Stem 1	0.580
	CRR073298	Stem 2	0.649
	CRR073299	Stem 3	0.418
	CRR073300	Leaf 1	0.300
	CRR073301	Leaf 2	0.271
	CRR073302	Leaf 3	0.937
	CRR073303	Juvenile bud 1	0.528
	CRR073304	Juvenile bud 2	0.074
	CRR073305	Juvenile bud 3	0.265
	CRR073306	Third green 1	0.166
	CRR073307	Third green 2	0.035
	CRR073308	Third green 3	0.294
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.035
	CRR073311	Second white 3	0.056
	CRR073312	Silver flowering 1	0.025
	CRR073313	Silver flowering 2	0.162
	CRR073314	Silver flowering 3	0.353
	CRR073315	Gold flowering 1	0.154
	CRR073316	Gold flowering 2	0.375
	CRR073317	Gold flowering 3	0.116
	CRR073318	Tawny withering 1	0.897
	CRR073319	Tawny withering 2	0.702
	CRR073320	Tawny withering 3	0.348