Gene detail

Detail information of GWHGAAZE029149

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011099164.1	1.1874E-161	PREDICTED: putative receptor-like protein kinase At5g39000 [Sesamum indicum]
COG	YP_008151634.1	3E-23	hypothetical protein SCE1572_26190
Swissprot	tr\|Q9SCZ4\|FERON_ARATH	3E-101	Receptor-like protein kinase FERONIA (Precursor)
trEMBL	tr\|M1APN7\|M1APN7_SOLTU	6E-150	Uncharacterized protein {ECO:0000313\|EnsemblPlants:PGSC0003DMT400027429}
TAIR10	AT3G51550.1	3E-87	Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	8729662	8732641	-
GWHAAZE00000009	mRNA	8729662	8732641	-
GWHAAZE00000009	exon	8731243	8732641	-
GWHAAZE00000009	exon	8730593	8730711	-
GWHAAZE00000009	exon	8730299	8730509	-
GWHAAZE00000009	exon	8729662	8729891	-
GWHAAZE00000009	CDS	8731243	8732641	-
GWHAAZE00000009	CDS	8730593	8730711	-
GWHAAZE00000009	CDS	8730299	8730509	-
GWHAAZE00000009	CDS	8729662	8729891	-

Transcript Sequence
>GWHTAAZE029183 ATGATAGCAACTGCAGTGATAATTATAATCACTATATTGAATATCATTGTCTATAAACTTCGACAACTTCGCGACGCAAACTTTGCCAAGAATTCGGACATTTCATCATCCCAACAAATAGCAGAAGCAAACCTTGGCGAGAATTTAGAAGTATTAACACCGCAACAACACCAGGAAGTGAACCTTGGCGAGGATTCAAGCATACCACCGTCGTTGAAATTAGAACAATTATGCCGTCGCTTTTCACTTGCTCATATCCTAATGGCCACCAACAACTTTGACGATGCATTAATCATTGGTCACGGTGGGTTTGGGAAGGTGTACAAAGGGGTCATCGATGATGGGACAGTTACCGTCGCCATAAAGAGGTTAAGTCCTACGTCCAAACAAGGGGCACCCCAGTTTTGGACAGAGGTGGAGTTGCTTTCTAAATTTCGGCACAGCCATCTTGTTTCATTGATTGGTTACTGTAACAATCGCGATGAGATGATACTTGTTTATGAGTACATGGCTCGTGGATCCCTCGCGGATCATCTGTACAAACTTGGTCCGAATGGTAATAATTCTCTAACCTTGTCTTGGGTGCAGCGCGTAAAGATTTGCATTGGGGCAGCACAGGGTTTGGATTACCTTCATACTGGTACGGGTATCCATGATAGGGTCATTCATCGTGACTTGAAGAGCTCAAACATTCTATTGGATGATAGCGGGGCAGCTAAGGTATCAGATTTTGGGCTGTCTAAAATTGGCCCCGCAAATCAGTCCGCCTCCGCCTCATCACATGTCAGTACCAGCGTCAAAGGCACATTTGGGTATGTGGATCCTGAGTATTTGGTGACCCATAGACTCACTCGAAAGTCTGACGTTTACTCCTTTGGCGTTGTCTTGTTAGAAGTGTTGTCCGGGAGGCGGGCTGTAGATTTAAAACGCTGTGAGGAGCAGTGGGGTCTTGCTGGATGGGCCAAAGAATGCATAAAGAAAGGAGAACTAGATCAAATTATTGACCCGAATTTGAGATGGCAAATCTTGCCAAGTTCTTCGACAGCATTTGTGAAAATAGCGGATCAATGCTTGCATTATCGTTCGAAAAAACGCCCTACAATGGCTGAGGTGGTGGCCTCGCTTGAGTCCACATTGGCATTGCAAGAGAGAAGAGATTCTTCAATGTTTGAGGCGGATTTTTTGAATTTAGGAGGGACTTTTGACAACCAAGAGAATCTGGATAATTCCTTACTAGAATCCGAGGTGAATAATGGTGGTGATGGTGAGCATCTGGGTGAAGAGATAGATAATATTTTGTCATCCGGTGAGGCAAGCAATTTGCAGTCTCGTGTAAGGCCTGCCAGAATGACACCGTTCAAAAGGATGGCGCGGCTGTTTTTCTTTGGGAAATCTCAAGCAAGTGAAATAAGCAACTTGGAATCCCTACAATATGACTTTGGTACTCTTAAGGTTGCGACAGATAATTTCTCTGATGCTAACAAGCTTGGAAATGGTGCATTTGGAGTTGTGTTCAAGGGTAGGCTACAAGATGGTCGAGTTATAGCTGTGAAAAGGTTATCTTCTAATTCTGGAGAAGCTGAAACAGAATTTAGAAATGAGGCGTCATTAGCGGCAAAGCTTCGACATAGGAACTTGGTTGGGCTTCTGGGATTCTGCTCGAAAGGAACAGAAAGGCTCCTTGTCTCCGAGTTTGTTCCCAATGGCAGTCTTGACTACTACTTGCGTGATCCAATCAAGCGTGCAACCTTGGCTTGGGAACTGCGTTATAAAATCATAAGAGCTGTTGCTCAGGGGCTTCTTTATCTTCACGAAGATTCTCCTGTGCGGATTATTCATCGTCATGTCAAACCTAGCAACATTCTATTAGATACAGAGATGAACCCGAAAATTTCTGATTTTTGCTTCGCAAAGTTTTGTAATTGGGAAGGAACTGAAACCAATCTTGTGGGGACATAG

Network for GWHGAAZE029149

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	98	373	1.40E-48
PF00069.26	Pkinase	491	652	3.40E-31

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.709
	SRR3591706	second leaf	0.247
	SRR3591707	mature leaf	0.334
	SRR3591708	Shoot apex	0.340
	SRR3591709	Stem	1.369
	SRR3591710	White floral bud	0.374
	SRR3591711	White flower	0.730
	SRR3591712	Green floral bud	0.239
	SRR3591713	Yellow flower	1.052
SRP173429	SRR8316895	Juvenile bud stage	0.052
	SRR8316896	Juvenile bud stage	0.243
	SRR8316897	Juvenile bud stage	3.751
	SRR8316894	Third green stage	0.173
	SRR8316900	Third green stage	0.000
	SRR8316901	Third green stage	0.000
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.036
	SRR8316903	Complete white stage	0.059
	SRR8316902	Silver flowering stage	0.006
	SRR8316904	Silver flowering stage	0.015
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.363
	SRR8316907	Gold flowering stage	0.089
	SRR8316908	Gold flowering stage	2.717
SRP132670	SRR6706286	Control	0.096
	SRR6706287	Light intensity 50%	0.070
	SRR6706288	Light intensity 20%	0.125
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.015
	CNS0095593	Slightly white alabastrum(diploid) 2	0.252
	CNS0095594	Slightly white alabastrum(diploid) 3	0.013
	CNS0095595	Whole white alabastrum(diploid) 2	0.057
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.049
	CNS0095598	Silvery flower (diploied) 1	0.033
	CNS0095599	Silvery flower (diploied) 2	0.115
	CNS0095600	Silvery flower (diploied) 3	0.328
	CNS0095601	Golden flower (diploid) 1	0.343
	CNS0095602	Golden flower (diploid) 2	0.107
	CNS0095603	Golden flower (diploid) 3	0.205
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.082
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.087
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.344
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.000
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.048
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.021
	CNS0095610	Silvery flower (tetraploid) 1	0.411
	CNS0095611	Silvery flower (tetraploid) 2	0.138
	CNS0095612	Silvery flower (tetraploid) 3	0.382
	CNS0095613	Golden flower (tetraploid) 1	0.535
	CNS0095614	Golden flower (tetraploid) 2	0.576
	CNS0095615	Golden flower (tetraploid) 3	0.170
CRA001975	CRR073297	Stem 1	0.011
	CRR073298	Stem 2	0.066
	CRR073299	Stem 3	0.058
	CRR073300	Leaf 1	0.025
	CRR073301	Leaf 2	0.026
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.030
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.008
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.081
	CRR073313	Silver flowering 2	0.052
	CRR073314	Silver flowering 3	0.012
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.039
	CRR073318	Tawny withering 1	0.076
	CRR073319	Tawny withering 2	0.079
	CRR073320	Tawny withering 3	0.000