Detail information of GWHGAAZE029217


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006433401.10hypothetical protein CICLE_v10000531mg [Citrus clementina]
COGYP_003497318.13E-137molecular chaperone DnaK
Swissprottr|Q03685|BIP5_TOBAC0Luminal-binding protein 5 (Precursor)
trEMBLtr|V4TAP7|V4TAP7_9ROSI0Uncharacterized protein {ECO:0000313|EMBL:ESR46641.1}
TAIR10AT5G28540.10heat shock protein 70 (Hsp 70) family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene1296320512967938-
GWHAAZE00000009mRNA1296320512967938-
GWHAAZE00000009exon1296320512963625-
GWHAAZE00000009exon1296421112964293-
GWHAAZE00000009exon1296438112964535-
GWHAAZE00000009exon1296484212965273-
GWHAAZE00000009exon1296535312965514-
GWHAAZE00000009exon1296566012965874-
GWHAAZE00000009exon1296630512966584-
GWHAAZE00000009exon1296788412967938-
GWHAAZE00000009CDS1296788412967938-
GWHAAZE00000009CDS1296630512966584-
GWHAAZE00000009CDS1296566012965874-
GWHAAZE00000009CDS1296535312965514-
GWHAAZE00000009CDS1296484212965273-
GWHAAZE00000009CDS1296438112964535-
GWHAAZE00000009CDS1296421112964293-
GWHAAZE00000009CDS1296320512963625-
Transcript Sequence

Network for GWHGAAZE029217

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00012.21HSP702384681.20E-74
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09490HSPA5, BIP Protein export map03060
Protein processing in endoplasmic reticulummap04141
Thyroid hormone synthesismap04918

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.069
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.097
SRR3591710White floral bud0.036
SRR3591711White flower0.000
SRR3591712Green floral bud0.000
SRR3591713Yellow flower8.055
SRP173429 SRR8316895Juvenile bud stage 0.107
SRR8316896Juvenile bud stage 0.032
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.042
SRR8316900Third green stage 0.064
SRR8316901Third green stage 0.046
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.000
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.035
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.165
SRR6706287Light intensity 50%0.120
SRR6706288Light intensity 20%0.053
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.096
CNS0095593Slightly white alabastrum(diploid) 20.252
CNS0095594Slightly white alabastrum(diploid) 30.238
CNS0095595Whole white alabastrum(diploid) 20.000
CNS0095596Whole white alabastrum(diploid) 30.061
CNS0095597Whole white alabastrum(diploid) 40.095
CNS0095598Silvery flower (diploied) 10.066
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.162
CNS0095601Golden flower (diploid) 10.177
CNS0095602Golden flower (diploid) 21.408
CNS0095603Golden flower (diploid) 32.444
CNS0095604Slightly white alabastrum(tetraploid) 10.032
CNS0095605Slightly white alabastrum(tetraploid) 20.079
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.023
CNS0095608Whole white alabastrum(tetraploid) 20.156
CNS0095609Whole white alabastrum(tetraploid) 30.165
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.021
CNS0095612Silvery flower (tetraploid) 30.027
CNS0095613Golden flower (tetraploid) 10.089
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 32.459
CRA001975CRR073297Stem 10.034
CRR073298Stem 20.132
CRR073299Stem 30.012
CRR073300Leaf 10.000
CRR073301Leaf 20.025
CRR073302Leaf 30.033
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.000
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.022
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.054
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.010
CRR073314Silver flowering 30.028
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000