Detail information of GWHGAAZE029255


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011094123.10PREDICTED: calcium-transporting ATPase 10, plasma membrane-type isoform X1 [Sesamum indicum]
COGYP_501831.13E-121calcium-translocating P-type ATPase, PMCA-type
Swissprottr|Q9LF79|ACA8_ARATH0Calcium-transporting ATPase 8, plasma membrane-type
trEMBLtr|K7LC34|K7LC34_SOYBN0Calcium-transporting ATPase {ECO:0000256|RuleBase:RU361146}
TAIR10AT5G57110.20autoinhibited Ca2+ -ATPase, isoform 8

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene1593719815965884-
GWHAAZE00000009mRNA1593719815965884-
GWHAAZE00000009exon1596579415965884-
GWHAAZE00000009exon1596511915965273-
GWHAAZE00000009exon1596479715964874-
GWHAAZE00000009exon1596464015964711-
GWHAAZE00000009exon1595103915951122-
GWHAAZE00000009exon1595039015950472-
GWHAAZE00000009exon1595017415950282-
GWHAAZE00000009exon1595003015950085-
GWHAAZE00000009exon1594918215949224-
GWHAAZE00000009exon1594901215949095-
GWHAAZE00000009exon1594372515943790-
GWHAAZE00000009exon1594354715943645-
GWHAAZE00000009exon1594272715942837-
GWHAAZE00000009exon1594237215942542-
GWHAAZE00000009exon1594167415941733-
GWHAAZE00000009exon1594083615941000-
GWHAAZE00000009exon1594061715940733-
GWHAAZE00000009exon1593969815939796-
GWHAAZE00000009exon1593922515939323-
GWHAAZE00000009exon1593901315939113-
GWHAAZE00000009exon1593880515938850-
GWHAAZE00000009exon1593840315938537-
GWHAAZE00000009exon1593766315937770-
GWHAAZE00000009exon1593747015937561-
GWHAAZE00000009exon1593729715937394-
GWHAAZE00000009exon1593719815937226-
GWHAAZE00000009CDS1596579415965884-
GWHAAZE00000009CDS1596511915965273-
GWHAAZE00000009CDS1596479715964874-
GWHAAZE00000009CDS1596464015964711-
GWHAAZE00000009CDS1595103915951122-
GWHAAZE00000009CDS1595039015950472-
GWHAAZE00000009CDS1595017415950282-
GWHAAZE00000009CDS1595003015950085-
GWHAAZE00000009CDS1594918215949224-
GWHAAZE00000009CDS1594901215949095-
GWHAAZE00000009CDS1594372515943790-
GWHAAZE00000009CDS1594354715943645-
GWHAAZE00000009CDS1594272715942837-
GWHAAZE00000009CDS1594237215942542-
GWHAAZE00000009CDS1594167415941733-
GWHAAZE00000009CDS1594083615941000-
GWHAAZE00000009CDS1594061715940733-
GWHAAZE00000009CDS1593969815939796-
GWHAAZE00000009CDS1593922515939323-
GWHAAZE00000009CDS1593901315939113-
GWHAAZE00000009CDS1593880515938850-
GWHAAZE00000009CDS1593840315938537-
GWHAAZE00000009CDS1593766315937770-
GWHAAZE00000009CDS1593747015937561-
GWHAAZE00000009CDS1593729715937394-
GWHAAZE00000009CDS1593719815937226-
Transcript Sequence

Network for GWHGAAZE029255

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0136
CFinderModule0152


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00122.21E1-E2_ATPase522511.00E-31
PF13246.7Cation_ATPase2793621.40E-11
PF00702.27Hydrolase3935502.80E-12
PF00689.22Cation_ATPase_C6087855.60E-38
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0000166molecular_functionnucleotide binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf11.041
SRR3591706second leaf7.400
SRR3591707mature leaf6.408
SRR3591708Shoot apex10.477
SRR3591709Stem10.224
SRR3591710White floral bud0.027
SRR3591711White flower0.000
SRR3591712Green floral bud0.064
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.086
SRR8316896Juvenile bud stage 0.408
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.267
SRR8316900Third green stage 0.158
SRR8316901Third green stage 0.038
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.000
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.064
SRR8316905Silver flowering stage0.028
SRR8316906Gold flowering stage 0.924
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.018
SRP132670SRR6706286Control0.047
SRR6706287Light intensity 50%0.030
SRR6706288Light intensity 20%0.029
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.182
CNS0095593Slightly white alabastrum(diploid) 20.249
CNS0095594Slightly white alabastrum(diploid) 30.367
CNS0095595Whole white alabastrum(diploid) 20.135
CNS0095596Whole white alabastrum(diploid) 30.091
CNS0095597Whole white alabastrum(diploid) 40.139
CNS0095598Silvery flower (diploied) 10.154
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.033
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.000
CNS0095603Golden flower (diploid) 30.009
CNS0095604Slightly white alabastrum(tetraploid) 17.498
CNS0095605Slightly white alabastrum(tetraploid) 25.626
CNS0095606Slightly white alabastrum(tetraploid) 39.439
CNS0095607Whole white alabastrum(tetraploid) 14.903
CNS0095608Whole white alabastrum(tetraploid) 23.834
CNS0095609Whole white alabastrum(tetraploid) 37.570
CNS0095610Silvery flower (tetraploid) 15.740
CNS0095611Silvery flower (tetraploid) 26.765
CNS0095612Silvery flower (tetraploid) 35.609
CNS0095613Golden flower (tetraploid) 13.076
CNS0095614Golden flower (tetraploid) 27.642
CNS0095615Golden flower (tetraploid) 35.535
CRA001975CRR073297Stem 10.082
CRR073298Stem 20.126
CRR073299Stem 30.022
CRR073300Leaf 10.000
CRR073301Leaf 20.029
CRR073302Leaf 30.022
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.000
CRR073306Third green 10.009
CRR073307Third green 20.000
CRR073308Third green 30.001
CRR073309Second white 10.000
CRR073310Second white 20.088
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.032
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.019
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000