Detail information of GWHGAAZE029330


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009788536.14.1914E-170PREDICTED: bifunctional epoxide hydrolase 2-like [Nicotiana sylvestris]
COGYP_003299257.13E-86alpha/beta hydrolase fold protein
trEMBLtr|B3VMR3|B3VMR3_NICBE4E-169Epoxide hydrolase {ECO:0000313|EMBL:ACE82565.1}
TAIR10AT3G05600.12E-117alpha/beta-Hydrolases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene1903499819040089-
GWHAAZE00000009mRNA1903499819040089-
GWHAAZE00000009exon1903499819035259-
GWHAAZE00000009exon1903659919036843-
GWHAAZE00000009exon1903962519040089-
GWHAAZE00000009CDS1903962519040089-
GWHAAZE00000009CDS1903659919036843-
GWHAAZE00000009CDS1903499819035259-
Transcript Sequence

Network for GWHGAAZE029330

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0153


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00561.21Abhydrolase_1251529.90E-21
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003824molecular_functioncatalytic activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.088
SRR3591706second leaf1.417
SRR3591707mature leaf1.454
SRR3591708Shoot apex0.522
SRR3591709Stem0.000
SRR3591710White floral bud5.346
SRR3591711White flower4.364
SRR3591712Green floral bud8.103
SRR3591713Yellow flower0.164
SRP173429 SRR8316895Juvenile bud stage 59.076
SRR8316896Juvenile bud stage 104.109
SRR8316897Juvenile bud stage 8.910
SRR8316894Third green stage 55.027
SRR8316900Third green stage 325.161
SRR8316901Third green stage 304.575
SRR8316898Complete white stage 311.504
SRR8316899Complete white stage 855.080
SRR8316903Complete white stage 386.488
SRR8316902Silver flowering stage38.061
SRR8316904Silver flowering stage60.643
SRR8316905Silver flowering stage37.495
SRR8316906Gold flowering stage 39.368
SRR8316907Gold flowering stage 20.875
SRR8316908Gold flowering stage 15.956
SRP132670SRR6706286Control560.560
SRR6706287Light intensity 50%599.685
SRR6706288Light intensity 20%661.555
CNP0000432CNS0095592Slightly white alabastrum(diploid) 182.367
CNS0095593Slightly white alabastrum(diploid) 2182.290
CNS0095594Slightly white alabastrum(diploid) 3108.054
CNS0095595Whole white alabastrum(diploid) 2199.571
CNS0095596Whole white alabastrum(diploid) 3218.433
CNS0095597Whole white alabastrum(diploid) 4278.982
CNS0095598Silvery flower (diploied) 124.013
CNS0095599Silvery flower (diploied) 256.634
CNS0095600Silvery flower (diploied) 393.130
CNS0095601Golden flower (diploid) 125.087
CNS0095602Golden flower (diploid) 219.260
CNS0095603Golden flower (diploid) 318.311
CNS0095604Slightly white alabastrum(tetraploid) 116.883
CNS0095605Slightly white alabastrum(tetraploid) 216.850
CNS0095606Slightly white alabastrum(tetraploid) 317.086
CNS0095607Whole white alabastrum(tetraploid) 122.951
CNS0095608Whole white alabastrum(tetraploid) 228.562
CNS0095609Whole white alabastrum(tetraploid) 371.423
CNS0095610Silvery flower (tetraploid) 120.422
CNS0095611Silvery flower (tetraploid) 216.718
CNS0095612Silvery flower (tetraploid) 315.690
CNS0095613Golden flower (tetraploid) 14.517
CNS0095614Golden flower (tetraploid) 26.201
CNS0095615Golden flower (tetraploid) 32.110
CRA001975CRR073297Stem 1127.538
CRR073298Stem 2133.732
CRR073299Stem 3175.594
CRR073300Leaf 1291.080
CRR073301Leaf 2262.233
CRR073302Leaf 3339.790
CRR073303Juvenile bud 1463.311
CRR073304Juvenile bud 2812.385
CRR073305Juvenile bud 3381.083
CRR073306Third green 1153.037
CRR073307Third green 2125.373
CRR073308Third green 385.042
CRR073309Second white 147.505
CRR073310Second white 230.179
CRR073311Second white 312.111
CRR073312Silver flowering 110.059
CRR073313Silver flowering 216.847
CRR073314Silver flowering 315.770
CRR073315Gold flowering 14.743
CRR073316Gold flowering 24.772
CRR073317Gold flowering 35.881
CRR073318Tawny withering 12.141
CRR073319Tawny withering 22.393
CRR073320Tawny withering 31.072