Detail information of GWHGAAZE029331


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009788536.11.1096E-168PREDICTED: bifunctional epoxide hydrolase 2-like [Nicotiana sylvestris]
COGYP_003299257.11E-86alpha/beta hydrolase fold protein
trEMBLtr|B3VMR3|B3VMR3_NICBE4E-168Epoxide hydrolase {ECO:0000313|EMBL:ACE82565.1}
TAIR10AT3G05600.13E-118alpha/beta-Hydrolases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene1908658819092630-
GWHAAZE00000009mRNA1908658819092630-
GWHAAZE00000009exon1908658819086849-
GWHAAZE00000009exon1908921119089455-
GWHAAZE00000009exon1909216619092630-
GWHAAZE00000009CDS1909216619092630-
GWHAAZE00000009CDS1908921119089455-
GWHAAZE00000009CDS1908658819086849-
Transcript Sequence

Network for GWHGAAZE029331

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0153


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00561.21Abhydrolase_1251531.50E-21
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003824molecular_functioncatalytic activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf10.281
SRR3591706second leaf12.682
SRR3591707mature leaf8.112
SRR3591708Shoot apex7.064
SRR3591709Stem1.490
SRR3591710White floral bud110.590
SRR3591711White flower58.804
SRR3591712Green floral bud137.403
SRR3591713Yellow flower7.559
SRP173429 SRR8316895Juvenile bud stage 78.246
SRR8316896Juvenile bud stage 132.441
SRR8316897Juvenile bud stage 45.357
SRR8316894Third green stage 58.161
SRR8316900Third green stage 363.501
SRR8316901Third green stage 306.283
SRR8316898Complete white stage 562.744
SRR8316899Complete white stage 1024.705
SRR8316903Complete white stage 727.902
SRR8316902Silver flowering stage116.327
SRR8316904Silver flowering stage178.299
SRR8316905Silver flowering stage112.424
SRR8316906Gold flowering stage 165.502
SRR8316907Gold flowering stage 100.806
SRR8316908Gold flowering stage 56.734
SRP132670SRR6706286Control487.155
SRR6706287Light intensity 50%545.861
SRR6706288Light intensity 20%605.372
CNP0000432CNS0095592Slightly white alabastrum(diploid) 171.967
CNS0095593Slightly white alabastrum(diploid) 2172.494
CNS0095594Slightly white alabastrum(diploid) 393.773
CNS0095595Whole white alabastrum(diploid) 2174.036
CNS0095596Whole white alabastrum(diploid) 3183.992
CNS0095597Whole white alabastrum(diploid) 4292.713
CNS0095598Silvery flower (diploied) 1136.698
CNS0095599Silvery flower (diploied) 2309.851
CNS0095600Silvery flower (diploied) 3548.430
CNS0095601Golden flower (diploid) 1249.633
CNS0095602Golden flower (diploid) 2232.342
CNS0095603Golden flower (diploid) 3232.527
CNS0095604Slightly white alabastrum(tetraploid) 187.805
CNS0095605Slightly white alabastrum(tetraploid) 281.962
CNS0095606Slightly white alabastrum(tetraploid) 383.155
CNS0095607Whole white alabastrum(tetraploid) 190.737
CNS0095608Whole white alabastrum(tetraploid) 2116.755
CNS0095609Whole white alabastrum(tetraploid) 3255.415
CNS0095610Silvery flower (tetraploid) 197.695
CNS0095611Silvery flower (tetraploid) 294.731
CNS0095612Silvery flower (tetraploid) 381.566
CNS0095613Golden flower (tetraploid) 118.829
CNS0095614Golden flower (tetraploid) 218.415
CNS0095615Golden flower (tetraploid) 311.667
CRA001975CRR073297Stem 1136.243
CRR073298Stem 2156.662
CRR073299Stem 3225.417
CRR073300Leaf 1289.930
CRR073301Leaf 2286.006
CRR073302Leaf 3379.628
CRR073303Juvenile bud 1532.088
CRR073304Juvenile bud 21006.548
CRR073305Juvenile bud 3464.179
CRR073306Third green 1322.979
CRR073307Third green 2323.367
CRR073308Third green 3198.210
CRR073309Second white 1340.930
CRR073310Second white 2191.160
CRR073311Second white 381.620
CRR073312Silver flowering 141.524
CRR073313Silver flowering 242.392
CRR073314Silver flowering 364.293
CRR073315Gold flowering 115.404
CRR073316Gold flowering 215.917
CRR073317Gold flowering 318.392
CRR073318Tawny withering 13.657
CRR073319Tawny withering 24.322
CRR073320Tawny withering 31.867