Gene detail

Detail information of GWHGAAZE029386

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011091018.1	2.5698E-180	PREDICTED: serine/threonine-protein kinase Aurora-3 isoform X1 [Sesamum indicum]
COG	YP_003108732.1	8E-40	serine/threonine protein kinase with PASTA sensor(s)
Swissprot	tr\|O64629\|AUR3_ARATH	1E-172	Serine/threonine-protein kinase Aurora-3
trEMBL	tr\|A0A061E1R8\|A0A061E1R8_THECC	1E-178	Ataurora3 {ECO:0000313\|EMBL:EOX96173.1}
TAIR10	AT2G45490.1	7E-137	ataurora3

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	20934968	20937830	-
GWHAAZE00000009	mRNA	20934968	20937830	-
GWHAAZE00000009	exon	20937649	20937830	-
GWHAAZE00000009	exon	20937133	20937375	-
GWHAAZE00000009	exon	20936276	20936371	-
GWHAAZE00000009	exon	20935337	20935551	-
GWHAAZE00000009	exon	20935174	20935246	-
GWHAAZE00000009	exon	20934968	20935069	-
GWHAAZE00000009	five_prime_UTR	20937769	20937830	-
GWHAAZE00000009	CDS	20937649	20937768	-
GWHAAZE00000009	CDS	20937133	20937375	-
GWHAAZE00000009	CDS	20936276	20936371	-
GWHAAZE00000009	CDS	20935337	20935551	-
GWHAAZE00000009	CDS	20935174	20935246	-
GWHAAZE00000009	CDS	20934968	20935069	-

Transcript Sequence
>GWHTAAZE029420 TTCCTTCTAAATCTGAATCAGAAACCCCCCAATTCGTTCTCCTACATTCCCAAATCACAAAAATGGCGTCCAAAACTGAAAAACAAAACCCTAAAAAACAATGGTCCTTAGAAGACTTCGAGATCGGAAAGCCCCTCGGCAAGGGCAAATTCGGACGTGTCTACCTCGCCCGTGAAATCAAGAGCCAGTACATAGTGGCATTGAAGGTGATATTCAAAGAGCAAACAGAGAAGTACAGATTGCACCACCAGCTTAAAAGAGAGATGGAGATCCAAACTAGTCTTCGTCACCCTAACGTTCTCAGGCTCTTTGGTTGGTTTCATGATGATGAGAGAATTTACTTGATCTTGGAGTATGCTCATGGTGGTGAGCTTTATAGACAGCTCCGCAAAACCGGTCATCTCGGCGAGAAACAAGCTGCCACTTACATATCAAGCTTAGCACAAGCATTGGCATATTGTCACGAGAAGGGCGTGATTCATAGGGATATCAAGCCTGAAAACTTGTTACTTGATCATGAGGGTGTATTGAAGATTGCGGATTTTGGATGGTCGGTCCAATCGAGAAGCAAGAGATACACCATGTGTGGAACTTTGGACTATTTAGCACCAGAAATGGTGGAGAACAAAGCTCATGATTATGCTGTTGATAATTGGACATTGGGTATCCTTTGTTATGAGTTATTGTATGGCAGCCCTCCATTTGAGGCAGAAAGCCAAGTAGATACGTTCAAAAGGATTATGAAGATTGACCTGAATTTCCCTTCCACCCCTCAAGTTTCTGCAGAGGCTAAAAATCTCATTACTCGGCTTCTCGTGAAGGACTCTTCCAAAAGGCTCTCTCTTAAGAAGATAATTGAGCACCCTTGGATTATCAAGAATGCTGATCCCACAAGTACCTGCTACAAATAA

Network for GWHGAAZE029386

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	19	270	2.30E-76

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	Aur

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	7.597
	SRR3591706	second leaf	6.162
	SRR3591707	mature leaf	6.311
	SRR3591708	Shoot apex	8.533
	SRR3591709	Stem	9.400
	SRR3591710	White floral bud	5.085
	SRR3591711	White flower	6.508
	SRR3591712	Green floral bud	8.057
	SRR3591713	Yellow flower	6.268
SRP173429	SRR8316895	Juvenile bud stage	11.908
	SRR8316896	Juvenile bud stage	17.243
	SRR8316897	Juvenile bud stage	8.540
	SRR8316894	Third green stage	6.680
	SRR8316900	Third green stage	21.102
	SRR8316901	Third green stage	21.053
	SRR8316898	Complete white stage	5.860
	SRR8316899	Complete white stage	20.080
	SRR8316903	Complete white stage	13.570
	SRR8316902	Silver flowering stage	8.924
	SRR8316904	Silver flowering stage	11.537
	SRR8316905	Silver flowering stage	5.549
	SRR8316906	Gold flowering stage	12.409
	SRR8316907	Gold flowering stage	15.802
	SRR8316908	Gold flowering stage	19.253
SRP132670	SRR6706286	Control	10.482
	SRR6706287	Light intensity 50%	10.932
	SRR6706288	Light intensity 20%	10.881
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	13.764
	CNS0095593	Slightly white alabastrum(diploid) 2	17.146
	CNS0095594	Slightly white alabastrum(diploid) 3	15.218
	CNS0095595	Whole white alabastrum(diploid) 2	14.500
	CNS0095596	Whole white alabastrum(diploid) 3	14.031
	CNS0095597	Whole white alabastrum(diploid) 4	16.632
	CNS0095598	Silvery flower (diploied) 1	14.950
	CNS0095599	Silvery flower (diploied) 2	11.439
	CNS0095600	Silvery flower (diploied) 3	20.853
	CNS0095601	Golden flower (diploid) 1	14.058
	CNS0095602	Golden flower (diploid) 2	16.021
	CNS0095603	Golden flower (diploid) 3	16.772
	CNS0095604	Slightly white alabastrum(tetraploid) 1	15.192
	CNS0095605	Slightly white alabastrum(tetraploid) 2	16.134
	CNS0095606	Slightly white alabastrum(tetraploid) 3	21.822
	CNS0095607	Whole white alabastrum(tetraploid) 1	11.671
	CNS0095608	Whole white alabastrum(tetraploid) 2	10.481
	CNS0095609	Whole white alabastrum(tetraploid) 3	15.627
	CNS0095610	Silvery flower (tetraploid) 1	18.837
	CNS0095611	Silvery flower (tetraploid) 2	17.361
	CNS0095612	Silvery flower (tetraploid) 3	14.933
	CNS0095613	Golden flower (tetraploid) 1	14.356
	CNS0095614	Golden flower (tetraploid) 2	17.051
	CNS0095615	Golden flower (tetraploid) 3	18.268
CRA001975	CRR073297	Stem 1	17.050
	CRR073298	Stem 2	15.688
	CRR073299	Stem 3	17.031
	CRR073300	Leaf 1	20.785
	CRR073301	Leaf 2	17.019
	CRR073302	Leaf 3	16.764
	CRR073303	Juvenile bud 1	17.277
	CRR073304	Juvenile bud 2	13.989
	CRR073305	Juvenile bud 3	17.885
	CRR073306	Third green 1	7.174
	CRR073307	Third green 2	9.607
	CRR073308	Third green 3	7.947
	CRR073309	Second white 1	10.334
	CRR073310	Second white 2	7.609
	CRR073311	Second white 3	9.922
	CRR073312	Silver flowering 1	10.514
	CRR073313	Silver flowering 2	9.601
	CRR073314	Silver flowering 3	7.579
	CRR073315	Gold flowering 1	8.095
	CRR073316	Gold flowering 2	13.165
	CRR073317	Gold flowering 3	7.654
	CRR073318	Tawny withering 1	12.404
	CRR073319	Tawny withering 2	10.487
	CRR073320	Tawny withering 3	15.870