Detail information of GWHGAAZE029415


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010268045.11.1193E-179PREDICTED: probable protein disulfide-isomerase A6 [Nelumbo nucifera]
COGNP_622856.11E-24thiol-disulfide isomerase
Swissprottr|P38661|PDIA6_MEDSA8E-171Probable protein disulfide-isomerase A6 (Precursor)
trEMBLtr|A0A068VBP9|A0A068VBP9_COFCA2E-179Coffea canephora DH200=94 genomic scaffold, scaffold_219 {ECO:0000313|EMBL:CDP18230.1}
TAIR10AT2G47470.13E-131thioredoxin family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene2177899121786118-
GWHAAZE00000009mRNA2177899121786118-
GWHAAZE00000009exon2178596721786118-
GWHAAZE00000009exon2178347221783556-
GWHAAZE00000009exon2178202621782123-
GWHAAZE00000009exon2178180621781861-
GWHAAZE00000009exon2178026121780378-
GWHAAZE00000009exon2177988821779915-
GWHAAZE00000009exon2177949521779586-
GWHAAZE00000009exon2177924621779402-
GWHAAZE00000009exon2177899121779167-
GWHAAZE00000009CDS2178596721786118-
GWHAAZE00000009CDS2178347221783556-
GWHAAZE00000009CDS2178202621782123-
GWHAAZE00000009CDS2178180621781861-
GWHAAZE00000009CDS2178026121780378-
GWHAAZE00000009CDS2177988821779915-
GWHAAZE00000009CDS2177949521779586-
GWHAAZE00000009CDS2177924621779402-
GWHAAZE00000009CDS2177899121779167-
Transcript Sequence

Network for GWHGAAZE029415

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00085.21Thioredoxin251272.20E-32
PF00085.21Thioredoxin1432463.20E-32
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09584PDIA6, TXNDC7 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName
GO:0045454biological_processcell redox homeostasis
GO:0016853molecular_functionisomerase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf391.829
SRR3591706second leaf207.478
SRR3591707mature leaf130.348
SRR3591708Shoot apex233.225
SRR3591709Stem242.364
SRR3591710White floral bud253.092
SRR3591711White flower253.319
SRR3591712Green floral bud264.698
SRR3591713Yellow flower215.147
SRP173429 SRR8316895Juvenile bud stage 206.259
SRR8316896Juvenile bud stage 268.857
SRR8316897Juvenile bud stage 109.802
SRR8316894Third green stage 96.856
SRR8316900Third green stage 296.722
SRR8316901Third green stage 281.134
SRR8316898Complete white stage 123.167
SRR8316899Complete white stage 312.103
SRR8316903Complete white stage 175.309
SRR8316902Silver flowering stage116.605
SRR8316904Silver flowering stage147.706
SRR8316905Silver flowering stage59.674
SRR8316906Gold flowering stage 211.608
SRR8316907Gold flowering stage 214.016
SRR8316908Gold flowering stage 237.633
SRP132670SRR6706286Control220.623
SRR6706287Light intensity 50%223.051
SRR6706288Light intensity 20%245.975
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1289.203
CNS0095593Slightly white alabastrum(diploid) 2291.653
CNS0095594Slightly white alabastrum(diploid) 3267.063
CNS0095595Whole white alabastrum(diploid) 2206.038
CNS0095596Whole white alabastrum(diploid) 3233.009
CNS0095597Whole white alabastrum(diploid) 4176.291
CNS0095598Silvery flower (diploied) 1180.485
CNS0095599Silvery flower (diploied) 2188.655
CNS0095600Silvery flower (diploied) 3253.234
CNS0095601Golden flower (diploid) 1144.835
CNS0095602Golden flower (diploid) 2238.496
CNS0095603Golden flower (diploid) 3235.891
CNS0095604Slightly white alabastrum(tetraploid) 1264.193
CNS0095605Slightly white alabastrum(tetraploid) 2241.618
CNS0095606Slightly white alabastrum(tetraploid) 3412.594
CNS0095607Whole white alabastrum(tetraploid) 1142.241
CNS0095608Whole white alabastrum(tetraploid) 2121.501
CNS0095609Whole white alabastrum(tetraploid) 3299.245
CNS0095610Silvery flower (tetraploid) 1297.174
CNS0095611Silvery flower (tetraploid) 2213.477
CNS0095612Silvery flower (tetraploid) 3186.435
CNS0095613Golden flower (tetraploid) 1145.886
CNS0095614Golden flower (tetraploid) 2261.443
CNS0095615Golden flower (tetraploid) 3141.733
CRA001975CRR073297Stem 1326.638
CRR073298Stem 2287.560
CRR073299Stem 3370.630
CRR073300Leaf 1304.666
CRR073301Leaf 2287.219
CRR073302Leaf 3396.893
CRR073303Juvenile bud 1341.546
CRR073304Juvenile bud 2361.051
CRR073305Juvenile bud 3339.297
CRR073306Third green 1153.579
CRR073307Third green 2155.805
CRR073308Third green 3155.299
CRR073309Second white 1164.979
CRR073310Second white 2154.281
CRR073311Second white 3124.615
CRR073312Silver flowering 1142.883
CRR073313Silver flowering 2143.282
CRR073314Silver flowering 3157.248
CRR073315Gold flowering 1117.258
CRR073316Gold flowering 2149.398
CRR073317Gold flowering 3121.928
CRR073318Tawny withering 1292.461
CRR073319Tawny withering 2288.145
CRR073320Tawny withering 3306.101