Detail information of GWHGAAZE029607


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010030186.19.60457E-36PREDICTED: shaggy-related protein kinase kappa [Eucalyptus grandis]
Swissprottr|Q39019|KSG10_ARATH2E-36Shaggy-related protein kinase kappa
trEMBLtr|A0A059AUM1|A0A059AUM1_EUCGR4E-36Uncharacterized protein {ECO:0000313|EMBL:KCW57135.1}
TAIR10AT1G09840.63E-31shaggy-like protein kinase 41

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene2980707429809683+
GWHAAZE00000009mRNA2980707429809683+
GWHAAZE00000009exon2980707429807076+
GWHAAZE00000009exon2980724729807330+
GWHAAZE00000009exon2980785829807973+
GWHAAZE00000009exon2980955729809683+
GWHAAZE00000009CDS2980707429807076+
GWHAAZE00000009CDS2980724729807330+
GWHAAZE00000009CDS2980785829807973+
GWHAAZE00000009CDS2980955729809683+
Transcript Sequence

Network for GWHGAAZE029607

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0155


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf68.690
SRR3591706second leaf118.416
SRR3591707mature leaf147.732
SRR3591708Shoot apex71.945
SRR3591709Stem216.644
SRR3591710White floral bud69.222
SRR3591711White flower39.974
SRR3591712Green floral bud123.233
SRR3591713Yellow flower33.068
SRP173429 SRR8316895Juvenile bud stage 35.948
SRR8316896Juvenile bud stage 43.455
SRR8316897Juvenile bud stage 18.190
SRR8316894Third green stage 22.619
SRR8316900Third green stage 102.159
SRR8316901Third green stage 106.878
SRR8316898Complete white stage 43.275
SRR8316899Complete white stage 178.338
SRR8316903Complete white stage 69.485
SRR8316902Silver flowering stage11.619
SRR8316904Silver flowering stage10.626
SRR8316905Silver flowering stage4.876
SRR8316906Gold flowering stage 14.964
SRR8316907Gold flowering stage 15.056
SRR8316908Gold flowering stage 16.945
SRP132670SRR6706286Control119.869
SRR6706287Light intensity 50%136.594
SRR6706288Light intensity 20%168.755
CNP0000432CNS0095592Slightly white alabastrum(diploid) 162.851
CNS0095593Slightly white alabastrum(diploid) 273.564
CNS0095594Slightly white alabastrum(diploid) 345.513
CNS0095595Whole white alabastrum(diploid) 2119.706
CNS0095596Whole white alabastrum(diploid) 3118.490
CNS0095597Whole white alabastrum(diploid) 4104.771
CNS0095598Silvery flower (diploied) 184.323
CNS0095599Silvery flower (diploied) 281.361
CNS0095600Silvery flower (diploied) 359.265
CNS0095601Golden flower (diploid) 169.343
CNS0095602Golden flower (diploid) 264.190
CNS0095603Golden flower (diploid) 365.632
CNS0095604Slightly white alabastrum(tetraploid) 174.002
CNS0095605Slightly white alabastrum(tetraploid) 258.794
CNS0095606Slightly white alabastrum(tetraploid) 393.646
CNS0095607Whole white alabastrum(tetraploid) 165.106
CNS0095608Whole white alabastrum(tetraploid) 2101.303
CNS0095609Whole white alabastrum(tetraploid) 3148.053
CNS0095610Silvery flower (tetraploid) 164.059
CNS0095611Silvery flower (tetraploid) 282.920
CNS0095612Silvery flower (tetraploid) 327.710
CNS0095613Golden flower (tetraploid) 140.575
CNS0095614Golden flower (tetraploid) 250.637
CNS0095615Golden flower (tetraploid) 322.042
CRA001975CRR073297Stem 135.158
CRR073298Stem 229.937
CRR073299Stem 328.020
CRR073300Leaf 198.049
CRR073301Leaf 295.009
CRR073302Leaf 356.245
CRR073303Juvenile bud 1110.550
CRR073304Juvenile bud 2105.706
CRR073305Juvenile bud 3105.311
CRR073306Third green 124.088
CRR073307Third green 220.729
CRR073308Third green 321.123
CRR073309Second white 13.255
CRR073310Second white 22.671
CRR073311Second white 30.757
CRR073312Silver flowering 10.046
CRR073313Silver flowering 20.132
CRR073314Silver flowering 30.735
CRR073315Gold flowering 137.682
CRR073316Gold flowering 230.360
CRR073317Gold flowering 322.812
CRR073318Tawny withering 145.911
CRR073319Tawny withering 236.031
CRR073320Tawny withering 334.358