Detail information of GWHGAAZE029618


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDO97610.12.20808E-98unnamed protein product [Coffea canephora]
trEMBLtr|A0A068TMN8|A0A068TMN8_COFCA8E-99Coffea canephora DH200=94 genomic scaffold, scaffold_1 {ECO:0000313|EMBL:CDO97610.1}
TAIR10AT3G02430.16E-44Protein of unknown function (DUF679)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene2992408629924745-
GWHAAZE00000009mRNA2992408629924745-
GWHAAZE00000009exon2992408629924745-
GWHAAZE00000009CDS2992408629924745-
Transcript Sequence

Network for GWHGAAZE029618

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0141


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05078.13DUF679502133.10E-63
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf8.480
SRR3591706second leaf5.726
SRR3591707mature leaf4.743
SRR3591708Shoot apex1.929
SRR3591709Stem81.109
SRR3591710White floral bud15.662
SRR3591711White flower32.043
SRR3591712Green floral bud6.462
SRR3591713Yellow flower21.052
SRP173429 SRR8316895Juvenile bud stage 43.881
SRR8316896Juvenile bud stage 18.828
SRR8316897Juvenile bud stage 12.283
SRR8316894Third green stage 9.892
SRR8316900Third green stage 8.198
SRR8316901Third green stage 13.442
SRR8316898Complete white stage 1.475
SRR8316899Complete white stage 52.056
SRR8316903Complete white stage 3.327
SRR8316902Silver flowering stage4.009
SRR8316904Silver flowering stage4.281
SRR8316905Silver flowering stage4.890
SRR8316906Gold flowering stage 33.503
SRR8316907Gold flowering stage 27.940
SRR8316908Gold flowering stage 28.172
SRP132670SRR6706286Control11.120
SRR6706287Light intensity 50%13.439
SRR6706288Light intensity 20%5.476
CNP0000432CNS0095592Slightly white alabastrum(diploid) 145.115
CNS0095593Slightly white alabastrum(diploid) 254.983
CNS0095594Slightly white alabastrum(diploid) 371.068
CNS0095595Whole white alabastrum(diploid) 228.435
CNS0095596Whole white alabastrum(diploid) 33.838
CNS0095597Whole white alabastrum(diploid) 431.129
CNS0095598Silvery flower (diploied) 198.540
CNS0095599Silvery flower (diploied) 2117.099
CNS0095600Silvery flower (diploied) 344.917
CNS0095601Golden flower (diploid) 1199.129
CNS0095602Golden flower (diploid) 2117.082
CNS0095603Golden flower (diploid) 3120.309
CNS0095604Slightly white alabastrum(tetraploid) 10.153
CNS0095605Slightly white alabastrum(tetraploid) 20.086
CNS0095606Slightly white alabastrum(tetraploid) 30.613
CNS0095607Whole white alabastrum(tetraploid) 10.643
CNS0095608Whole white alabastrum(tetraploid) 20.344
CNS0095609Whole white alabastrum(tetraploid) 30.325
CNS0095610Silvery flower (tetraploid) 12.856
CNS0095611Silvery flower (tetraploid) 21.180
CNS0095612Silvery flower (tetraploid) 33.162
CNS0095613Golden flower (tetraploid) 114.917
CNS0095614Golden flower (tetraploid) 28.912
CNS0095615Golden flower (tetraploid) 311.832
CRA001975CRR073297Stem 18.140
CRR073298Stem 28.232
CRR073299Stem 310.126
CRR073300Leaf 17.812
CRR073301Leaf 210.951
CRR073302Leaf 35.830
CRR073303Juvenile bud 16.520
CRR073304Juvenile bud 29.396
CRR073305Juvenile bud 319.173
CRR073306Third green 15.267
CRR073307Third green 20.709
CRR073308Third green 33.208
CRR073309Second white 16.355
CRR073310Second white 29.176
CRR073311Second white 35.924
CRR073312Silver flowering 183.890
CRR073313Silver flowering 275.877
CRR073314Silver flowering 374.971
CRR073315Gold flowering 147.126
CRR073316Gold flowering 248.633
CRR073317Gold flowering 3128.609
CRR073318Tawny withering 168.314
CRR073319Tawny withering 2158.830
CRR073320Tawny withering 355.259